1 Genome wide association study

1.1 Phenotypes

1.1.1 Figure 1

1.1.2 Thermal Breadth Correlation

1.2 Manhattan plots

1.3 Strict cutoff 10-5

1.3.1 Summary

GWAS SNPs SNPs annotated to genes Unique genes Sig DEGs NS DEGs No RNAseq data
CTmax 21 19 12 9 3 0
CTmin 53 50 26 11 12 3
ThermalBreadth 23 19 17 NA NA 17

1.3.2 Venn Diagram: SNPs & Genes

A) The top GWAS SNPs (10^-5) associated with each phenotype. B. The unique genes associated with those top SNPs

  1. The top GWAS SNPs (10^-5) associated with each phenotype. B. The unique genes associated with those top SNPs

Without thermal breadth

A) The top GWAS SNPs (10^-5) associated with each phenotype. B. The unique genes associated with those top SNPs

  1. The top GWAS SNPs (10^-5) associated with each phenotype. B. The unique genes associated with those top SNPs

1.3.3 CTmax

1.3.3.1 All hits

ID gene feature Distance to gene AvgEff AvgMixedPval
2R_10330800_INS Oaz INTRON 0 0.2164 8.0e-07
2R_6398772_SNP lola INTRON 0 0.3719 9.0e-07
2R_6398743_SNP lola INTRON 0 0.3710 9.0e-07
2R_10330805_SNP Oaz INTRON 0 0.2332 1.0e-06
3R_22515826_SNP 0.1838 2.3e-06
2L_12384183_SNP bru-2 INTRON 0 0.1670 2.4e-06
3R_25373467_SNP 0.3578 2.5e-06
2R_17564376_SNP CG30263 SYNONYMOUS_CODING 0 0.1794 2.6e-06
2R_10330722_SNP Oaz INTRON 0 0.2064 3.0e-06
X_3381582_SNP CR44999 INTRON 0 0.1864 3.2e-06
X_3381582_SNP CG10803 INTRON 0 0.1864 3.2e-06
X_3381590_SNP CG10803 INTRON 0 0.1864 3.2e-06
X_3381590_SNP CR44999 INTRON 0 0.1864 3.2e-06
2R_10330717_SNP Oaz INTRON 0 0.2102 3.5e-06
X_3381391_SNP CR44999 INTRON 0 0.1804 3.7e-06
X_3381391_SNP CG10803 INTRON 0 0.1804 3.7e-06
X_3381587_SNP CR44999 INTRON 0 0.1849 4.1e-06
X_3381587_SNP CG10803 INTRON 0 0.1849 4.1e-06
3L_9575326_SNP CG42673 INTRON 0 0.2063 6.0e-06
X_5876026_SNP Grip INTRON 0 -0.1524 6.0e-06
3R_3427376_SNP CG34127 INTRON 0 0.1614 7.6e-06
2L_19428598_SNP CG13085 INTRON 0 0.1940 8.4e-06
2L_19428598_SNP CG16771 NON_SYNONYMOUS_CODING 0 0.1940 8.4e-06
2R_10330701_SNP Oaz INTRON 0 0.2015 9.7e-06
2L_19428336_SNP CG13085 INTRON 0 0.2192 9.9e-06
2L_19428336_SNP CG16771 SYNONYMOUS_CODING 0 0.2192 9.9e-06
3R_20025347_SNP twin INTRON 0 0.1599 1.0e-05

1.3.3.2 Feature count

feature n
INTRON 22
SYNONYMOUS_CODING 2
NON_SYNONYMOUS_CODING 1

1.3.3.3 Gene counts

gene n
Oaz 5
CG10803 4
CR44999 4
CG13085 2
CG16771 2
lola 2
bru-2 1
CG30263 1
CG34127 1
CG42673 1
Grip 1
twin 1

1.3.4 CTmin

1.3.4.1 All hits

ID gene feature Distance to gene AvgEff AvgMixedPval
2R_20313579_SNP prom INTRON 0 0.7260 0.0e+00
2R_20313579_SNP CG42383 UPSTREAM 954 0.7260 0.0e+00
X_4385442_SNP CR32773 INTRON 0 1.0300 1.0e-07
3R_13900959_SNP 0.6348 2.0e-07
2R_20308502_SNP prom INTRON 0 0.6173 4.0e-07
3R_12992895_SNP Mur89F INTRON 0 -0.6868 7.0e-07
2R_20313917_SNP prom INTRON 0 0.6276 9.0e-07
2R_20313922_DEL prom INTRON 0 0.6276 9.0e-07
2R_20313930_SNP prom INTRON 0 0.6276 9.0e-07
2R_20313933_SNP prom INTRON 0 0.6276 9.0e-07
2R_20313935_INS prom INTRON 0 0.6276 9.0e-07
2R_20313938_SNP prom INTRON 0 0.6276 9.0e-07
2R_20313940_MNP prom INTRON 0 0.6276 9.0e-07
2R_20308558_SNP prom INTRON 0 0.6119 1.0e-06
2R_20250118_SNP bs INTRON 0 0.5472 1.0e-06
2R_20250118_SNP CR44811 INTRON 0 0.5472 1.0e-06
2R_20301097_SNP CG45068 SYNONYMOUS_CODING 0 0.5562 1.1e-06
2R_20301097_SNP CG45069 UTR_5_PRIME 0 0.5562 1.1e-06
2R_20301239_SNP CG45068 NON_SYNONYMOUS_CODING 0 0.5434 1.1e-06
2R_20301239_SNP CG45069 UTR_5_PRIME 0 0.5434 1.1e-06
2R_20308533_SNP prom INTRON 0 0.5994 1.2e-06
2R_20313914_SNP prom INTRON 0 0.6215 1.3e-06
2L_2612712_SNP -0.7705 1.4e-06
2R_20313927_SNP prom INTRON 0 0.6177 1.5e-06
2R_20313911_SNP prom INTRON 0 0.6056 1.8e-06
2R_20307893_SNP prom NON_SYNONYMOUS_CODING 0 0.5823 1.8e-06
2R_20313916_SNP prom INTRON 0 0.6222 1.9e-06
2R_20308565_SNP prom INTRON 0 0.6001 1.9e-06
2R_20309964_SNP prom INTRON 0 0.6214 2.0e-06
2R_20309106_SNP prom INTRON 0 0.5709 2.2e-06
3R_11364111_SNP CG18519 SYNONYMOUS_CODING 0 0.6916 2.2e-06
2R_20313919_SNP prom INTRON 0 0.6250 2.4e-06
3R_14850882_SNP CG14285 NON_SYNONYMOUS_CODING 0 0.7111 3.1e-06
3R_14850882_SNP CG14286 DOWNSTREAM 307 0.7111 3.1e-06
2R_20313912_SNP prom INTRON 0 0.6180 3.2e-06
2L_3465546_SNP msl-2 NON_SYNONYMOUS_CODING 0 0.9493 3.2e-06
2L_3465546_SNP Pdsw UPSTREAM 611 0.9493 3.2e-06
2R_20301123_SNP CG45069 UTR_5_PRIME 0 0.5247 3.3e-06
2R_20301123_SNP CG45068 NON_SYNONYMOUS_CODING 0 0.5247 3.3e-06
3R_13552400_SNP Lgr1 INTRON 0 -0.9664 3.6e-06
3R_11367299_SNP CG18519 NON_SYNONYMOUS_CODING 0 0.7277 4.0e-06
3R_11288771_SNP AdamTS-A INTRON 0 0.9176 4.2e-06
2R_20301091_SNP CG45069 UTR_5_PRIME 0 0.5258 4.2e-06
2R_20301091_SNP CG45068 SYNONYMOUS_CODING 0 0.5258 4.2e-06
2R_12301745_SNP Sema-2b INTRON 0 -0.5963 4.2e-06
2R_12301745_SNP Menl-2 DOWNSTREAM 575 -0.5963 4.2e-06
3R_12990694_SNP Mur89F INTRON 0 0.5249 4.3e-06
2R_20309307_SNP prom INTRON 0 0.5642 4.8e-06
3R_9949217_SNP twf SYNONYMOUS_CODING 0 0.7970 5.6e-06
3R_9949217_SNP 140up DOWNSTREAM 668 0.7970 5.6e-06
3R_13002842_SNP Mur89F INTRON 0 0.5265 5.7e-06
2R_20309122_SNP prom INTRON 0 0.5473 5.8e-06
3R_12997215_SNP Mur89F INTRON 0 0.5159 6.0e-06
2L_3396579_SNP CR44792 DOWNSTREAM 744 0.9004 6.6e-06
2L_3396577_SNP CR44792 DOWNSTREAM 746 0.8995 6.7e-06
3R_13552010_SNP Lgr1 INTRON 0 -1.0970 6.7e-06
3L_4694662_SNP CG15876 SYNONYMOUS_CODING 0 -0.5194 7.5e-06
3L_4694662_SNP RhoGEF64C INTRON 0 -0.5194 7.5e-06
X_5639729_SNP IntS6 INTRON 0 0.8784 7.5e-06
2L_2612282_INS CG15395 DOWNSTREAM 1000 -0.7986 7.6e-06
2R_7024700_SNP BBS4 SYNONYMOUS_CODING 0 0.8879 7.8e-06
2R_20313809_SNP prom INTRON 0 0.5613 9.0e-06
3L_5853164_SNP 0.5565 9.6e-06
2L_3885863_SNP capu INTRON 0 0.4909 9.7e-06

1.3.4.2 Feature count

feature n
INTRON 37
DOWNSTREAM 6
NON_SYNONYMOUS_CODING 6
SYNONYMOUS_CODING 6
UTR_5_PRIME 4
UPSTREAM 2

1.3.4.3 Gene counts

gene n
prom 24
CG45068 4
CG45069 4
Mur89F 4
CG18519 2
CR44792 2
Lgr1 2
140up 1
AdamTS-A 1
BBS4 1
bs 1
capu 1
CG14285 1
CG14286 1
CG15395 1
CG15876 1
CG42383 1
CR32773 1
CR44811 1
IntS6 1
Menl-2 1
msl-2 1
Pdsw 1
RhoGEF64C 1
Sema-2b 1
twf 1

1.3.5 Thermal Breadth

1.3.5.1 All hits

ID gene feature Distance to gene AvgMixedPval
3R_12992895_SNP Mur89F INTRON 0 1.00e-07
2R_20313579_SNP prom INTRON 0 6.00e-07
2R_20313579_SNP CG42383 UPSTREAM 954 6.00e-07
2R_7024700_SNP BBS4 SYNONYMOUS_CODING 0 8.00e-07
3R_13900959_SNP 1.30e-06
2R_20301097_SNP CG45068 SYNONYMOUS_CODING 0 1.40e-06
2R_20301097_SNP CG45069 UTR_5_PRIME 0 1.40e-06
2R_20301239_SNP CG45068 NON_SYNONYMOUS_CODING 0 1.40e-06
2R_20301239_SNP CG45069 UTR_5_PRIME 0 1.40e-06
2L_2612712_SNP 1.90e-06
3R_13552010_SNP Lgr1 INTRON 0 3.00e-06
2R_20301123_SNP CG45069 UTR_5_PRIME 0 3.30e-06
2R_20301123_SNP CG45068 NON_SYNONYMOUS_CODING 0 3.30e-06
2R_20301091_SNP CG45069 UTR_5_PRIME 0 3.40e-06
2R_20301091_SNP CG45068 SYNONYMOUS_CODING 0 3.40e-06
3R_5905483_SNP 3.60e-06
X_4385442_SNP CR32773 INTRON 0 4.30e-06
3R_13552400_SNP Lgr1 INTRON 0 4.50e-06
2L_20784197_SNP 5.60e-06
2L_3465546_SNP msl-2 NON_SYNONYMOUS_CODING 0 5.70e-06
2L_3465546_SNP Pdsw UPSTREAM 611 5.70e-06
3R_12991699_SNP Mur89F INTRON 0 6.10e-06
3R_12990694_SNP Mur89F INTRON 0 6.30e-06
3L_997191_SNP trio DOWNSTREAM 19 6.60e-06
3R_4488005_SNP p SYNONYMOUS_CODING 0 7.30e-06
3R_5901971_SNP CG5361 UPSTREAM 876 7.30e-06
X_18252257_DEL CG6106 UPSTREAM 657 8.10e-06
2R_20250118_SNP bs INTRON 0 9.40e-06
2R_20250118_SNP CR44811 INTRON 0 9.40e-06
X_5639729_SNP IntS6 INTRON 0 9.60e-06
3L_7002933_SNP Mp INTRON 0 1.01e-05
2R_17983519_SNP CG11073 INTRON 0 1.10e-05
3R_4487071_SNP p NON_SYNONYMOUS_CODING 0 1.11e-05
3R_4487071_SNP bel UPSTREAM 588 1.11e-05
2R_14565483_DEL CG44434 DOWNSTREAM 701 1.15e-05
2R_14565483_DEL CG44435 DOWNSTREAM 701 1.15e-05
2R_20308502_SNP prom INTRON 0 1.18e-05
2R_17103833_SNP CG15661 SYNONYMOUS_CODING 0 1.29e-05
3R_12997215_SNP Mur89F INTRON 0 1.29e-05
3R_17312898_SNP CG7922 SYNONYMOUS_CODING 0 1.31e-05
3R_12317718_SNP Cad89D SYNONYMOUS_CODING 0 1.33e-05
X_9640945_SNP Sp1 INTRON 0 1.33e-05
2R_11082462_SNP CG43829 UPSTREAM 452 1.39e-05
2L_14847936_SNP CG15279 INTRON 0 1.40e-05
3R_4247244_SNP CG45263 INTRON 0 1.45e-05
3R_4247244_SNP Obp85a UPSTREAM 925 1.45e-05
3R_12992188_SNP Mur89F INTRON 0 1.48e-05
X_18251508_DEL 1.49e-05
2L_18774061_SNP ham INTRON 0 1.53e-05
2L_18774061_SNP CR43804 UPSTREAM 224 1.53e-05
2R_20313919_SNP prom INTRON 0 1.53e-05
3R_17312919_SNP CG7922 SYNONYMOUS_CODING 0 1.60e-05
3R_12985727_SNP Mur89F INTRON 0 1.63e-05
2L_2612282_INS CG15395 DOWNSTREAM 1000 1.65e-05
2R_20313917_SNP prom INTRON 0 1.67e-05
2R_20313922_DEL prom INTRON 0 1.67e-05
2R_20313930_SNP prom INTRON 0 1.67e-05
2R_20313933_SNP prom INTRON 0 1.67e-05
2R_20313935_INS prom INTRON 0 1.67e-05
2R_20313938_SNP prom INTRON 0 1.67e-05
2R_20313940_MNP prom INTRON 0 1.67e-05
2R_20308565_SNP prom INTRON 0 1.69e-05
X_18251504_SNP 1.69e-05
X_18251505_SNP 1.69e-05
3L_4694906_SNP RhoGEF64C INTRON 0 1.71e-05
3L_4694906_SNP CG15876 UPSTREAM 61 1.71e-05
2R_17037739_INS CG30389 INTRON 0 1.72e-05
2R_1991490_SNP EcR INTRON 0 1.85e-05
2R_1991491_SNP EcR INTRON 0 1.85e-05
3L_12833443_SNP CG10960 INTRON 0 1.87e-05
2L_7751402_SNP CG7203 DOWNSTREAM 768 1.91e-05
3R_22095003_SNP CG6154 INTRON 0 1.91e-05
2R_20308558_SNP prom INTRON 0 1.92e-05
2L_9792840_SNP CG13123 INTRON 0 1.93e-05
2L_9792840_SNP nAChRalpha6 DOWNSTREAM 477 1.93e-05
3L_5853164_SNP 1.96e-05
3R_12992004_SNP Mur89F INTRON 0 2.03e-05
2R_5227902_SNP CG13954 INTRON 0 2.05e-05
2R_5227902_SNP CG13739 INTRON 0 2.05e-05
2R_3551128_SNP CG2065 UPSTREAM 163 2.07e-05
2R_3551128_SNP CG2070 DOWNSTREAM 215 2.07e-05
2R_3546887_SNP CG1339 SYNONYMOUS_CODING 0 2.09e-05
2R_3546887_SNP CG30495 DOWNSTREAM 321 2.09e-05
X_14994016_SNP Rab3-GEF SYNONYMOUS_CODING 0 2.11e-05
X_9641804_SNP Sp1 INTRON 0 2.12e-05
3R_19565063_SNP Hmgcr INTRON 0 2.13e-05
2R_20313914_SNP prom INTRON 0 2.16e-05
2R_20313927_SNP prom INTRON 0 2.16e-05
X_9641643_SNP Sp1 INTRON 0 2.17e-05
3R_9755267_SNP 2.25e-05
3R_9949217_SNP twf SYNONYMOUS_CODING 0 2.25e-05
3R_9949217_SNP 140up DOWNSTREAM 668 2.25e-05
X_12403029_SNP CG2556 INTRON 0 2.26e-05
3L_4694662_SNP CG15876 SYNONYMOUS_CODING 0 2.27e-05
3L_4694662_SNP RhoGEF64C INTRON 0 2.27e-05
2R_20308533_SNP prom INTRON 0 2.30e-05
X_9641727_SNP Sp1 INTRON 0 2.31e-05
3R_11367299_SNP CG18519 NON_SYNONYMOUS_CODING 0 2.32e-05
3R_13448666_DEL tRNA:CR33534 DOWNSTREAM 327 2.37e-05
3R_13448666_DEL CG14323 UPSTREAM 833 2.37e-05
3L_8696154_SNP 2.44e-05
2R_20313916_SNP prom INTRON 0 2.46e-05
X_7604829_INS 2.52e-05
3L_3844015_SNP 2.63e-05
3R_12992053_DEL Mur89F INTRON 0 2.66e-05
2R_20309106_SNP prom INTRON 0 2.67e-05
3R_12997318_SNP Mur89F INTRON 0 2.67e-05
2L_9508608_SNP CG33298 INTRON 0 2.71e-05
2L_1964167_SNP erm INTRON 0 2.72e-05
3L_16725026_SNP 2.81e-05
3R_12992010_SNP Mur89F INTRON 0 2.85e-05
2R_20313911_SNP prom INTRON 0 2.86e-05
X_18167373_DEL 2.88e-05
3R_13418241_SNP 2.89e-05
3R_24617170_SNP intr UTR_3_PRIME 0 2.93e-05
3R_24617170_SNP CG34295 DOWNSTREAM 965 2.93e-05
X_6297829_SNP 2.93e-05
3R_9755266_SNP 2.97e-05
3R_11388164_SNP 2.99e-05
2R_12230279_SNP CG7997 INTRON 0 3.02e-05
X_13151875_SNP mew INTRON 0 3.03e-05
X_13151875_SNP CG15742 NON_SYNONYMOUS_CODING 0 3.03e-05
2R_8502479_SNP CG45086 INTRON 0 3.05e-05
2R_8502479_SNP Galphaq INTRON 0 3.05e-05
3L_4694850_SNP RhoGEF64C INTRON 0 3.07e-05
3L_4694850_SNP CG15876 UPSTREAM 5 3.07e-05
3R_12992033_SNP Mur89F INTRON 0 3.07e-05
2L_3885863_SNP capu INTRON 0 3.08e-05
2R_7752530_SNP CG42531 DOWNSTREAM 84 3.09e-05
2R_7752530_SNP Damm DOWNSTREAM 151 3.09e-05
2L_7751417_SNP CG7203 DOWNSTREAM 753 3.10e-05
2L_5964548_SNP psd INTRON 0 3.13e-05
2L_5964548_SNP CG13992 DOWNSTREAM 843 3.13e-05
3R_13900177_SNP 3.14e-05
3R_13131971_SNP 3.19e-05
X_18167335_SNP 3.19e-05
X_7587146_DEL CHES-1-like INTRON 0 3.36e-05
X_3376568_SNP CR44999 INTRON 0 3.38e-05
X_3376568_SNP CG10804 UPSTREAM 213 3.38e-05
2R_20263548_SNP bs UTR_3_PRIME 0 3.40e-05
2L_7751376_SNP CG7203 DOWNSTREAM 794 3.41e-05
2L_7751399_SNP CG7203 DOWNSTREAM 771 3.42e-05
2R_12628367_SNP 3.46e-05
2R_7023942_SNP BBS4 INTRON 0 3.50e-05
2R_7023949_SNP BBS4 INTRON 0 3.50e-05
2R_7023958_SNP BBS4 INTRON 0 3.50e-05
2R_7023976_SNP BBS4 INTRON 0 3.50e-05
3R_17309679_SNP CG7922 NON_SYNONYMOUS_CODING 0 3.50e-05
2R_12369476_SNP 3.52e-05
X_18251526_SNP 3.53e-05
3R_4313545_SNP 3.54e-05
2L_5867252_SNP rau INTRON 0 3.61e-05
3R_13524790_SNP osa INTRON 0 3.61e-05
X_14993421_SNP Rab3-GEF INTRON 0 3.63e-05
2R_20263633_SNP bs UTR_3_PRIME 0 3.71e-05
3R_13332029_SNP Dscam3 UPSTREAM 640 3.71e-05
X_7588127_SNP CHES-1-like INTRON 0 3.74e-05
3R_11364111_SNP CG18519 SYNONYMOUS_CODING 0 3.75e-05
X_18251390_SNP 3.75e-05
2R_20307893_SNP prom NON_SYNONYMOUS_CODING 0 3.76e-05
3R_12435590_SNP NPF INTRON 0 3.76e-05
3R_19770578_SNP CG12268 INTRON 0 3.84e-05
3R_19770583_SNP CG12268 INTRON 0 3.84e-05
3R_19770588_SNP CG12268 INTRON 0 3.84e-05
3L_2294717_SNP MsR2 INTRON 0 3.86e-05
3R_11129613_SNP Tm1 INTRON 0 3.90e-05
X_6297782_SNP 3.98e-05
3R_5824500_SNP Spn85F NON_SYNONYMOUS_CODING 0 3.99e-05
3R_5824500_SNP CG5359 DOWNSTREAM 993 3.99e-05
X_18252264_SNP CG6106 UPSTREAM 650 4.04e-05
X_5631703_INS CG32758 UTR_5_PRIME 0 4.04e-05
X_5631703_INS IntS6 DOWNSTREAM 992 4.04e-05
3R_10655623_SNP btsz INTRON 0 4.07e-05
2L_7751543_DEL CG7203 DOWNSTREAM 626 4.08e-05
3L_2293540_SNP MsR2 INTRON 0 4.09e-05
2R_12628349_SNP 4.11e-05
3R_13002842_SNP Mur89F INTRON 0 4.12e-05
2R_12218440_SNP Vha44 INTRON 0 4.14e-05
3R_22094891_DEL CG6154 INTRON 0 4.17e-05
4_212564_SNP CG2316 INTRON 0 4.17e-05
3R_11288771_SNP AdamTS-A INTRON 0 4.21e-05
3L_3812775_SNP CG12006 SYNONYMOUS_CODING 0 4.23e-05
2R_7752475_SNP CG42531 DOWNSTREAM 29 4.24e-05
2R_7752475_SNP Damm DOWNSTREAM 206 4.24e-05
2R_8722614_SNP 4.28e-05
X_18252738_DEL CG6106 UPSTREAM 176 4.28e-05
X_18252748_SNP CG6106 UPSTREAM 166 4.28e-05
X_18251456_SNP 4.32e-05
2R_20309964_SNP prom INTRON 0 4.33e-05
2R_12628403_SNP 4.36e-05
2R_20263506_SNP bs NON_SYNONYMOUS_CODING 0 4.36e-05
2R_20263738_SNP bs UTR_3_PRIME 0 4.36e-05
2R_20263740_INS bs UTR_3_PRIME 0 4.36e-05
2R_20263742_SNP bs UTR_3_PRIME 0 4.36e-05
2R_20309307_SNP prom INTRON 0 4.37e-05
X_14994013_SNP Rab3-GEF SYNONYMOUS_CODING 0 4.37e-05
X_14994019_SNP Rab3-GEF SYNONYMOUS_CODING 0 4.37e-05
2R_2998199_SNP esn INTRON 0 4.46e-05
3R_22081036_SNP Ald DOWNSTREAM 652 4.46e-05
2R_20301145_SNP CG45068 SYNONYMOUS_CODING 0 4.47e-05
2R_20301145_SNP CG45069 UTR_5_PRIME 0 4.47e-05
3L_6639773_SNP 4.47e-05
2R_20313912_SNP prom INTRON 0 4.51e-05
3L_14197669_SNP nuf INTRON 0 4.54e-05
3L_14197669_SNP CG32141 DOWNSTREAM 275 4.54e-05
X_4985802_SNP CG15465 INTRON 0 4.56e-05
X_4985802_SNP rg INTRON 0 4.56e-05
3L_3329652_SNP CR45380 DOWNSTREAM 55 4.62e-05
3L_3329652_SNP CG14961 UPSTREAM 411 4.62e-05
3R_13419831_SNP CG7587 UPSTREAM 277 4.63e-05
2R_16825523_SNP Rx DOWNSTREAM 988 4.64e-05
3R_14850882_SNP CG14285 NON_SYNONYMOUS_CODING 0 4.64e-05
3R_14850882_SNP CG14286 DOWNSTREAM 307 4.64e-05
3L_3812970_SNP CG12006 SYNONYMOUS_CODING 0 4.66e-05
2L_3396579_SNP CR44792 DOWNSTREAM 744 4.67e-05
3R_17309591_SNP CG7922 INTRON 0 4.67e-05
3R_17314258_DEL 4.68e-05
X_12899932_SNP rad INTRON 0 4.68e-05
X_4986248_DEL CG15465 INTRON 0 4.74e-05
X_4986248_DEL rg INTRON 0 4.74e-05
2R_20269748_SNP mAChR-A INTRON 0 4.79e-05
2L_16699438_SNP grp NON_SYNONYMOUS_CODING 0 4.81e-05
2L_16699438_SNP CR43669 DOWNSTREAM 483 4.81e-05
2R_12451205_DEL DAT INTRON 0 4.81e-05
3L_7607016_SNP CG33275 INTRON 0 4.82e-05
3R_9755264_SNP 4.83e-05
2L_1611896_SNP CG14352 INTRON 0 4.85e-05
2L_1611896_SNP RFeSP DOWNSTREAM 533 4.85e-05
2R_14222653_DEL sbb INTRON 0 4.87e-05
2L_3396577_SNP CR44792 DOWNSTREAM 746 4.89e-05
3L_14092468_SNP 4.89e-05
3R_10974341_SNP 4.94e-05
X_5656121_SNP MAPk-Ak2 INTRON 0 4.94e-05
3L_9760566_SNP CG8177 INTRON 0 4.96e-05
X_20907278_SNP Ntf-2 INTRON 0 4.97e-05
X_20907279_SNP Ntf-2 INTRON 0 4.97e-05
3R_17309145_SNP CG7922 SYNONYMOUS_CODING 0 4.98e-05
2R_20313730_SNP prom INTRON 0 5.01e-05
2L_2592883_SNP CG15394 DOWNSTREAM 110 5.04e-05
3L_14188075_SNP nuf INTRON 0 5.09e-05
X_18167332_SNP 5.14e-05
3R_17313012_SNP CG7922 DOWNSTREAM 5 5.15e-05
2L_2612781_DEL 5.21e-05
2R_1618770_SNP 5.26e-05
X_14993547_SNP Rab3-GEF INTRON 0 5.29e-05
2L_14087933_SNP nAChRalpha5 INTRON 0 5.32e-05
2L_3013371_SNP CG17265 INTRON 0 5.32e-05
X_18251495_SNP 5.38e-05
3L_10374559_INS 5.47e-05
3L_12404345_SNP CG32103 INTRON 0 5.48e-05
2R_16825517_SNP Rx DOWNSTREAM 982 5.52e-05
2R_20260408_SNP bs INTRON 0 5.60e-05
3R_13421753_SNP Sgs5 UTR_3_PRIME 0 5.63e-05
3R_13421753_SNP CG7606 UPSTREAM 505 5.63e-05
2L_2612787_SNP 5.66e-05
2R_3769346_SNP Dgk UTR_5_PRIME 0 5.66e-05
X_7587379_SNP CHES-1-like INTRON 0 5.67e-05
3L_13974741_SNP CG17364 INTRON 0 5.74e-05
X_5908964_SNP CR44499 DOWNSTREAM 912 5.74e-05
3R_12985703_SNP Mur89F INTRON 0 5.79e-05
X_14994112_SNP Rab3-GEF SYNONYMOUS_CODING 0 5.81e-05
2R_19645190_SNP CG9850 INTRON 0 5.82e-05
X_9641716_SNP Sp1 INTRON 0 5.85e-05
3R_3439387_SNP CG34127 INTRON 0 5.86e-05
3R_12317562_SNP Cad89D INTRON 0 5.91e-05
3R_12317613_SNP Cad89D SYNONYMOUS_CODING 0 5.91e-05
X_9640876_SNP Sp1 INTRON 0 5.92e-05
X_9640960_SNP Sp1 INTRON 0 5.92e-05
2R_11632091_SNP CG30089 INTRON 0 5.98e-05
3R_13332023_DEL Dscam3 UPSTREAM 635 6.02e-05
3L_12544228_SNP sowah INTRON 0 6.04e-05
3R_10974468_SNP 6.10e-05
3R_19565035_SNP Hmgcr INTRON 0 6.10e-05
3R_19565036_SNP Hmgcr INTRON 0 6.10e-05
2R_20233630_SNP bs INTRON 0 6.16e-05
2R_19022154_SNP 6.27e-05
2R_20280846_SNP slik DOWNSTREAM 355 6.27e-05
3L_13935202_SNP CG32137 INTRON 0 6.35e-05
X_9210165_SNP CR44534 DOWNSTREAM 961 6.36e-05
2R_19551513_SNP Pde8 INTRON 0 6.37e-05
X_6443825_SNP CG34417 INTRON 0 6.44e-05
X_6444241_SNP CG34417 INTRON 0 6.44e-05
X_6446431_SNP CG34417 INTRON 0 6.44e-05
3L_18019988_SNP Eip75B INTRON 0 6.45e-05
3R_9949202_SNP twf SYNONYMOUS_CODING 0 6.45e-05
3R_9949202_SNP 140up DOWNSTREAM 683 6.45e-05
2R_7402770_SNP 6.47e-05
3R_12985546_SNP Mur89F SYNONYMOUS_CODING 0 6.50e-05
X_3945990_SNP 6.50e-05
3R_17313053_SNP CG7922 DOWNSTREAM 46 6.52e-05
3R_12992392_SNP Mur89F INTRON 0 6.53e-05
2R_11082631_SNP CG43829 UPSTREAM 621 6.56e-05
X_4986299_SNP rg INTRON 0 6.56e-05
X_4986299_SNP CG15465 INTRON 0 6.56e-05
2L_5613850_SNP CG14010 INTRON 0 6.58e-05
2R_20276009_SNP mAChR-A INTRON 0 6.63e-05
3L_17773480_SNP 6.66e-05
3R_12992032_SNP Mur89F INTRON 0 6.69e-05
X_14518598_SNP NetA INTRON 0 6.73e-05
2L_14847382_SNP CG15279 INTRON 0 6.75e-05
2R_7419910_SNP 6.80e-05
X_4986296_DEL rg INTRON 0 6.85e-05
X_4986296_DEL CG15465 INTRON 0 6.85e-05
3R_10655781_SNP btsz INTRON 0 6.88e-05
2R_12696827_SNP 7.02e-05
2R_20263539_SNP bs UTR_3_PRIME 0 7.04e-05
3R_13928920_SNP sr INTRON 0 7.14e-05
2L_9962482_SNP CG5850 SYNONYMOUS_CODING 0 7.15e-05
2L_9962482_SNP CR43683 DOWNSTREAM 378 7.15e-05
2R_17103509_SNP CG15661 SYNONYMOUS_CODING 0 7.15e-05
3R_17772582_SNP 7.17e-05
3R_12993769_SNP Mur89F INTRON 0 7.24e-05
4_214743_SNP CG2316 UPSTREAM 288 7.30e-05
4_214743_SNP CR44441 UPSTREAM 757 7.30e-05
X_14991195_SNP Rab3-GEF INTRON 0 7.35e-05
2R_7266548_SNP Tsp47F UTR_5_PRIME 0 7.37e-05
3R_19770553_SNP CG12268 INTRON 0 7.39e-05
3L_13379241_SNP CG10171 UTR_3_PRIME 0 7.40e-05
3L_13379241_SNP CG14110 DOWNSTREAM 216 7.40e-05
2L_4353069_SNP CG15429 SYNONYMOUS_CODING 0 7.44e-05
2R_20276477_SNP mAChR-A INTRON 0 7.47e-05
2L_14858849_SNP 7.48e-05
X_3945994_SNP 7.48e-05
X_4883035_SNP CR44833 INTRON 0 7.48e-05
2R_10963284_SNP 7.49e-05
2L_5684156_SNP 7.51e-05
2L_1611892_SNP CG14352 INTRON 0 7.54e-05
2L_1611892_SNP RFeSP DOWNSTREAM 537 7.54e-05
3R_3350035_SNP alpha-Est6 DOWNSTREAM 254 7.54e-05
3R_3350035_SNP alpha-Est7 UPSTREAM 560 7.54e-05
X_13400492_SNP Neto INTRON 0 7.54e-05
2R_20275800_SNP mAChR-A INTRON 0 7.55e-05
3R_22094885_SNP CG6154 INTRON 0 7.57e-05
2R_9208823_SNP 7.61e-05
3L_14070418_SNP btl INTRON 0 7.63e-05
3R_12996262_SNP Mur89F INTRON 0 7.65e-05
3R_17309666_SNP CG7922 INTRON 0 7.70e-05
3R_9755213_SNP 7.77e-05
2L_14839600_SNP CR43805 DOWNSTREAM 834 7.85e-05
3L_13381805_SNP Poc1 INTRON 0 7.88e-05
3L_13381805_SNP CG10171 UPSTREAM 798 7.88e-05
X_14993353_SNP Rab3-GEF INTRON 0 7.90e-05
X_13403437_SNP Neto INTRON 0 8.03e-05
2R_2589702_SNP CG45092 INTRON 0 8.11e-05
2R_2589702_SNP CG3409 INTRON 0 8.11e-05
2L_14839629_INS CR43805 DOWNSTREAM 804 8.12e-05
3L_7002948_SNP Mp INTRON 0 8.12e-05
2R_20270526_SNP mAChR-A INTRON 0 8.25e-05
2L_5942852_SNP Sfp26Ad SYNONYMOUS_CODING 0 8.31e-05
2L_5942852_SNP CR45289 DOWNSTREAM 268 8.31e-05
X_9641740_SNP Sp1 INTRON 0 8.32e-05
2L_8590036_SNP Sema-1a INTRON 0 8.33e-05
2L_8590036_SNP CR43855 DOWNSTREAM 334 8.33e-05
3R_3453798_SNP CG34127 INTRON 0 8.35e-05
3R_3453798_SNP CR44332 UPSTREAM 786 8.35e-05
4_216261_SNP CR44441 EXON 0 8.38e-05
2L_3233946_SNP 8.43e-05
2L_8325829_SNP CG7781 UPSTREAM 420 8.44e-05
3R_17307710_SNP CG7922 UPSTREAM 337 8.47e-05
3L_6639868_SNP 8.62e-05
2R_19551586_SNP Pde8 INTRON 0 8.63e-05
2L_3121567_SNP toc INTRON 0 8.68e-05
2L_5964588_SNP psd INTRON 0 8.69e-05
2L_5964588_SNP CG13992 DOWNSTREAM 803 8.69e-05
2L_6133846_SNP CR45719 UPSTREAM 172 8.74e-05
2L_9810997_SNP nAChRalpha6 INTRON 0 8.74e-05
2L_9811000_SNP nAChRalpha6 INTRON 0 8.74e-05
3L_13383636_SNP Poc1 UPSTREAM 530 8.77e-05
X_7585641_SNP CHES-1-like INTRON 0 8.81e-05
3R_17961180_SNP SKIP INTRON 0 8.88e-05
X_4533152_SNP pon DOWNSTREAM 7 8.92e-05
X_4533152_SNP CG3081 DOWNSTREAM 140 8.92e-05
2R_16711423_SNP insc SYNONYMOUS_CODING 0 8.93e-05
2L_9962445_SNP CG5850 INTRON 0 9.04e-05
2L_9962445_SNP CR43683 DOWNSTREAM 341 9.04e-05
X_14993974_SNP Rab3-GEF SYNONYMOUS_CODING 0 9.06e-05
3L_2293647_SNP MsR2 INTRON 0 9.08e-05
3R_5916394_SNP CR45054 DOWNSTREAM 147 9.08e-05
3R_5916394_SNP mir-317 UPSTREAM 454 9.08e-05
3R_7317976_SNP 9.08e-05
3R_17313134_SNP CG7922 DOWNSTREAM 127 9.11e-05
3R_5851098_SNP Mical INTRON 0 9.16e-05
3R_5851098_SNP CG31407 UPSTREAM 226 9.16e-05
2R_12835148_SNP Vha16-4 DOWNSTREAM 15 9.17e-05
2R_12835148_SNP CG34190 UPSTREAM 89 9.17e-05
3R_5285535_SNP GstZ2 INTRON 0 9.18e-05
3R_9755225_SNP 9.19e-05
X_7585423_SNP CHES-1-like INTRON 0 9.23e-05
3R_13434002_SNP sll SYNONYMOUS_CODING 0 9.28e-05
3R_13434033_SNP sll UTR_3_PRIME 0 9.28e-05
2R_20257613_SNP bs INTRON 0 9.30e-05
2R_20257613_SNP CR44811 UPSTREAM 401 9.30e-05
2L_17966311_SNP CG5674 INTRON 0 9.31e-05
2L_17966311_SNP btv NON_SYNONYMOUS_CODING 0 9.31e-05
3R_25873501_SNP CG7943 SYNONYMOUS_CODING 0 9.31e-05
3R_25873501_SNP CG15528 DOWNSTREAM 856 9.31e-05
2L_7751378_SNP CG7203 DOWNSTREAM 792 9.33e-05
3R_20707017_SNP CG11089 UTR_3_PRIME 0 9.35e-05
3R_20707017_SNP CG31121 DOWNSTREAM 171 9.35e-05
3R_7994186_SNP 9.36e-05
4_217807_DEL CG31998 DOWNSTREAM 510 9.40e-05
X_4985793_MNP rg INTRON 0 9.40e-05
X_4985793_MNP CG15465 INTRON 0 9.40e-05
2L_3427281_SNP pgant2 UPSTREAM 562 9.43e-05
3L_12404239_SNP CG32103 INTRON 0 9.45e-05
2R_3525595_SNP CG43340 INTRON 0 9.47e-05
3R_5721722_SNP Glut4EF INTRON 0 9.56e-05
2R_11006133_SNP chn INTRON 0 9.60e-05
2L_16629322_SNP CG42389 INTRON 0 9.61e-05
2L_16629322_SNP CR44151 UPSTREAM 149 9.61e-05
X_7585873_SNP CHES-1-like INTRON 0 9.63e-05
2R_3772313_SNP Dgk INTRON 0 9.68e-05
2L_7008310_SNP uif INTRON 0 9.69e-05
2L_14847378_SNP CG15279 INTRON 0 9.70e-05
3R_12996121_SNP Mur89F INTRON 0 9.76e-05
2R_16875395_SNP CG3216 SYNONYMOUS_CODING 0 9.77e-05
2R_20280640_SNP slik DOWNSTREAM 561 9.79e-05
3R_9585922_SNP CG34383 INTRON 0 9.90e-05
3R_17313074_SNP CG7922 DOWNSTREAM 67 9.93e-05
2L_14849398_SNP CG15279 INTRON 0 9.95e-05
2L_2601212_SNP CR44789 EXON 0 9.95e-05

1.3.5.2 Feature count

feature n
INTRON 197
DOWNSTREAM 60
UPSTREAM 37
SYNONYMOUS_CODING 32
NON_SYNONYMOUS_CODING 13
UTR_3_PRIME 11
UTR_5_PRIME 8
EXON 2

1.3.5.3 Gene counts

gene n
prom 23
Mur89F 19
bs 11
CG7922 11
Rab3-GEF 9
Sp1 8
CG7203 6
CHES-1-like 6
BBS4 5
CG15465 5
CG45068 5
CG45069 5
mAChR-A 5
rg 5
CG12268 4
CG15279 4
CG6106 4
Cad89D 3
CG15876 3
CG34417 3
CG6154 3
Hmgcr 3
MsR2 3
nAChRalpha6 3
RhoGEF64C 3
140up 2
btsz 2
CG10171 2
CG12006 2
CG13992 2
CG14352 2
CG15661 2
CG18519 2
CG2316 2
CG32103 2
CG34127 2
CG42531 2
CG43829 2
CG5850 2
CR43683 2
CR43805 2
CR44441 2
CR44792 2
CR44811 2
Damm 2
Dgk 2
Dscam3 2
EcR 2
IntS6 2
Lgr1 2
Mp 2
Neto 2
Ntf-2 2
nuf 2
p 2
Pde8 2
Poc1 2
psd 2
RFeSP 2
Rx 2
slik 2
sll 2
twf 2
AdamTS-A 1
Ald 1
alpha-Est6 1
alpha-Est7 1
bel 1
btl 1
btv 1
capu 1
CG10804 1
CG10960 1
CG11073 1
CG11089 1
CG13123 1
CG1339 1
CG13739 1
CG13954 1
CG14010 1
CG14110 1
CG14285 1
CG14286 1
CG14323 1
CG14961 1
CG15394 1
CG15395 1
CG15429 1
CG15528 1
CG15742 1
CG17265 1
CG17364 1
CG2065 1
CG2070 1
CG2556 1
CG30089 1
CG30389 1
CG30495 1
CG3081 1
CG31121 1
CG31407 1
CG31998 1
CG32137 1
CG32141 1
CG3216 1
CG32758 1
CG33275 1
CG33298 1
CG3409 1
CG34190 1
CG34295 1
CG34383 1
CG42383 1
CG42389 1
CG43340 1
CG44434 1
CG44435 1
CG45086 1
CG45092 1
CG45263 1
CG5359 1
CG5361 1
CG5674 1
CG7587 1
CG7606 1
CG7781 1
CG7943 1
CG7997 1
CG8177 1
CG9850 1
chn 1
CR32773 1
CR43669 1
CR43804 1
CR43855 1
CR44151 1
CR44332 1
CR44499 1
CR44534 1
CR44789 1
CR44833 1
CR44999 1
CR45054 1
CR45289 1
CR45380 1
CR45719 1
DAT 1
Eip75B 1
erm 1
esn 1
Galphaq 1
Glut4EF 1
grp 1
GstZ2 1
ham 1
insc 1
intr 1
MAPk-Ak2 1
mew 1
Mical 1
mir-317 1
msl-2 1
nAChRalpha5 1
NetA 1
NPF 1
Obp85a 1
osa 1
Pdsw 1
pgant2 1
pon 1
rad 1
rau 1
sbb 1
Sema-1a 1
Sfp26Ad 1
Sgs5 1
SKIP 1
sowah 1
Spn85F 1
sr 1
Tm1 1
toc 1
trio 1
tRNA:CR33534 1
Tsp47F 1
uif 1
Vha16-4 1
Vha44 1

1.4 Relaxed cutoff 10-4

1.4.1 Summary

GWAS SNPs SNPs annotated to genes Unique genes Sig DEGs NS DEGs No RNAseq data
CTmax 193 169 99 59 39 1
CTmin 348 262 151 72 72 7
ThermalBreadth 358 297 188 NA NA 188

1.4.2 Venn Diagram: SNPs & Genes

A) The top GWAS SNPs (10^-4) associated with each phenotype. B. The unique genes associated with those top SNPs

  1. The top GWAS SNPs (10^-4) associated with each phenotype. B. The unique genes associated with those top SNPs

Withouth thermal breadth

A) The top GWAS SNPs (10^-4) associated with each phenotype. B. The unique genes associated with those top SNPs

  1. The top GWAS SNPs (10^-4) associated with each phenotype. B. The unique genes associated with those top SNPs

1.4.3 CTmax

1.4.3.1 All hits

ID gene feature Distance to gene AvgMixedPval
2R_10330800_INS Oaz INTRON 0 8.00e-07
2R_6398772_SNP lola INTRON 0 9.00e-07
2R_6398743_SNP lola INTRON 0 9.00e-07
2R_10330805_SNP Oaz INTRON 0 1.00e-06
3R_22515826_SNP 2.30e-06
2L_12384183_SNP bru-2 INTRON 0 2.40e-06
3R_25373467_SNP 2.50e-06
2R_17564376_SNP CG30263 SYNONYMOUS_CODING 0 2.60e-06
2R_10330722_SNP Oaz INTRON 0 3.00e-06
X_3381582_SNP CR44999 INTRON 0 3.20e-06
X_3381582_SNP CG10803 INTRON 0 3.20e-06
X_3381590_SNP CG10803 INTRON 0 3.20e-06
X_3381590_SNP CR44999 INTRON 0 3.20e-06
2R_10330717_SNP Oaz INTRON 0 3.50e-06
X_3381391_SNP CR44999 INTRON 0 3.70e-06
X_3381391_SNP CG10803 INTRON 0 3.70e-06
X_3381587_SNP CR44999 INTRON 0 4.10e-06
X_3381587_SNP CG10803 INTRON 0 4.10e-06
3L_9575326_SNP CG42673 INTRON 0 6.00e-06
X_5876026_SNP Grip INTRON 0 6.00e-06
3R_3427376_SNP CG34127 INTRON 0 7.60e-06
2L_19428598_SNP CG13085 INTRON 0 8.40e-06
2L_19428598_SNP CG16771 NON_SYNONYMOUS_CODING 0 8.40e-06
2R_10330701_SNP Oaz INTRON 0 9.70e-06
2L_19428336_SNP CG13085 INTRON 0 9.90e-06
2L_19428336_SNP CG16771 SYNONYMOUS_CODING 0 9.90e-06
3R_20025347_SNP twin INTRON 0 1.00e-05
2R_10330633_INS Oaz INTRON 0 1.02e-05
3L_14419091_SNP bbg INTRON 0 1.03e-05
2R_10330626_SNP Oaz INTRON 0 1.04e-05
2R_10330630_SNP Oaz INTRON 0 1.04e-05
2R_10330637_SNP Oaz INTRON 0 1.04e-05
2L_12339508_INS CG31862 DOWNSTREAM 32 1.13e-05
3R_12743515_SNP iab-8 INTRON 0 1.18e-05
3R_22504616_SNP beat-VII INTRON 0 1.20e-05
2L_12339516_SNP CG31862 DOWNSTREAM 39 1.23e-05
2L_19428576_SNP CG16771 SYNONYMOUS_CODING 0 1.24e-05
2L_19428576_SNP CG13085 INTRON 0 1.24e-05
2R_10330676_DEL Oaz INTRON 0 1.25e-05
2R_10330688_SNP Oaz INTRON 0 1.25e-05
2R_10330693_SNP Oaz INTRON 0 1.25e-05
2L_19428030_SNP CG13085 INTRON 0 1.27e-05
2L_19428030_SNP CG16771 SYNONYMOUS_CODING 0 1.27e-05
2L_19437195_SNP CG10237 INTRON 0 1.30e-05
2R_10330686_SNP Oaz INTRON 0 1.32e-05
X_10735255_SNP sbr INTRON 0 1.32e-05
X_10735255_SNP CG15209 UPSTREAM 983 1.32e-05
X_10735262_INS sbr INTRON 0 1.32e-05
X_10735262_INS CG15209 UPSTREAM 975 1.32e-05
2L_12339502_SNP CG31862 DOWNSTREAM 25 1.34e-05
2L_19429383_SNP CG13085 INTRON 0 1.37e-05
2L_19429383_SNP CG16771 DOWNSTREAM 159 1.37e-05
3L_1853643_SNP CG13936 INTRON 0 1.42e-05
2R_10330636_SNP Oaz INTRON 0 1.43e-05
3R_20025331_SNP twin INTRON 0 1.44e-05
3R_22137625_SNP 1.46e-05
X_5876030_SNP Grip INTRON 0 1.48e-05
3R_6790711_SNP 1.56e-05
X_10125128_DEL Ipod UTR_3_PRIME 0 1.59e-05
X_3381972_SNP CG10803 SYNONYMOUS_CODING 0 1.60e-05
X_3381972_SNP CR44999 INTRON 0 1.60e-05
3R_3427301_SNP CG34127 INTRON 0 1.62e-05
2R_10330615_SNP Oaz INTRON 0 1.63e-05
2R_10330665_SNP Oaz INTRON 0 1.70e-05
X_16041977_SNP disco-r INTRON 0 1.70e-05
3L_11137528_SNP CG32082 INTRON 0 1.75e-05
3L_22193099_INS olf413 INTRON 0 1.75e-05
X_3381054_SNP CR44999 INTRON 0 1.78e-05
X_3381054_SNP CG10803 NON_SYNONYMOUS_CODING 0 1.78e-05
2L_12384190_SNP bru-2 INTRON 0 1.81e-05
X_14256062_SNP dpr8 INTRON 0 1.81e-05
2L_19426748_SNP CG13085 INTRON 0 1.85e-05
2L_19426748_SNP CG16771 INTRON 0 1.85e-05
2L_19426782_SNP CG16771 INTRON 0 1.85e-05
2L_19426782_SNP CG13085 INTRON 0 1.85e-05
X_14256077_SNP dpr8 INTRON 0 1.86e-05
2R_6398430_SNP lola INTRON 0 1.88e-05
X_10735231_INS sbr INTRON 0 1.88e-05
2L_19423677_SNP Pax INTRON 0 1.96e-05
2L_19423677_SNP CG16771 UPSTREAM 373 1.96e-05
2L_19429239_SNP CG13085 INTRON 0 1.97e-05
2L_19429239_SNP CG16771 DOWNSTREAM 15 1.97e-05
3L_22174657_SNP olf413 INTRON 0 2.06e-05
X_14256080_SNP dpr8 INTRON 0 2.23e-05
3R_22137592_SNP 2.27e-05
X_3382079_SNP CG10803 INTRON 0 2.27e-05
X_3382079_SNP CR44999 INTRON 0 2.27e-05
3L_2048836_SNP sls SYNONYMOUS_CODING 0 2.30e-05
2R_17564481_SNP CG30263 SYNONYMOUS_CODING 0 2.42e-05
3L_14421116_SNP bbg INTRON 0 2.44e-05
3R_18941021_SNP Rassf INTRON 0 2.59e-05
X_15413373_SNP Ac13E INTRON 0 2.62e-05
2L_19424626_SNP Pax INTRON 0 2.67e-05
2L_19424626_SNP CG16771 INTRON 0 2.67e-05
2L_12339554_SNP CG31862 DOWNSTREAM 77 2.71e-05
3R_6110171_SNP CG43143 INTRON 0 2.75e-05
2L_3243400_SNP 2.92e-05
2R_2894462_SNP Tsp42Ec INTRON 0 2.92e-05
2R_2894462_SNP CG30160 DOWNSTREAM 821 2.92e-05
X_5754038_SNP 2.95e-05
3L_22144030_SNP olf413 INTRON 0 3.03e-05
3L_4318551_SNP Claspin DOWNSTREAM 78 3.04e-05
3L_4318551_SNP CG32250 UPSTREAM 204 3.04e-05
2R_18905268_SNP twi INTRON 0 3.06e-05
2R_18905268_SNP CG42741 INTRON 0 3.06e-05
2R_4548600_SNP ptc SYNONYMOUS_CODING 0 3.13e-05
3R_22504742_SNP beat-VII INTRON 0 3.15e-05
2R_10330590_SNP Oaz INTRON 0 3.18e-05
2R_10330596_MNP Oaz INTRON 0 3.18e-05
2R_10330600_INS Oaz INTRON 0 3.18e-05
3L_14339933_SNP fz INTRON 0 3.23e-05
2L_19426685_SNP CG13085 INTRON 0 3.39e-05
2L_19426685_SNP CG16771 INTRON 0 3.39e-05
3L_22305238_SNP Ten-m INTRON 0 3.43e-05
2R_10330606_SNP Oaz INTRON 0 3.44e-05
2L_15220353_SNP 3.48e-05
3L_16157384_SNP CG5151 UTR_5_PRIME 0 3.55e-05
2R_9958844_SNP Prosap INTRON 0 3.56e-05
X_5928662_SNP 3.58e-05
3L_1853640_SNP CG13936 INTRON 0 3.62e-05
3R_7950242_SNP CG4702 INTRON 0 3.67e-05
3L_14404836_SNP CG3919 NON_SYNONYMOUS_CODING 0 3.68e-05
2L_18754429_SNP 3.70e-05
3L_14152568_SNP 3.73e-05
2L_19429322_SNP CG13085 INTRON 0 3.78e-05
2L_19429322_SNP CG16771 DOWNSTREAM 98 3.78e-05
2R_10330594_SNP Oaz INTRON 0 3.88e-05
3L_22646528_DEL CG33772 UPSTREAM 904 3.91e-05
2L_18754466_SNP 3.93e-05
3R_22805400_SNP CG14253 INTRON 0 3.97e-05
2L_18754162_SNP 4.09e-05
3L_16647994_SNP Baldspot INTRON 0 4.12e-05
3L_16647994_SNP snRNA:U12:73B DOWNSTREAM 888 4.12e-05
3R_23411999_SNP raps UTR_3_PRIME 0 4.13e-05
3R_23411999_SNP CG5639 DOWNSTREAM 197 4.13e-05
2L_12339589_SNP CG31862 DOWNSTREAM 112 4.51e-05
3L_1852858_SNP CG13936 INTRON 0 4.52e-05
2R_8432371_SNP fra INTRON 0 4.71e-05
2R_8432371_SNP CG33752 UPSTREAM 823 4.71e-05
3L_4596471_DEL Src64B INTRON 0 4.74e-05
3R_14376982_SNP 4.74e-05
3R_12743496_SNP iab-8 INTRON 0 4.76e-05
X_15304333_SNP Cngl INTRON 0 4.89e-05
X_3382087_SNP CG10803 INTRON 0 4.91e-05
X_3382087_SNP CR44999 INTRON 0 4.91e-05
2L_18753704_SNP 4.92e-05
3R_22180208_SNP CG33970 INTRON 0 5.02e-05
2L_16076386_SNP beat-Ia INTRON 0 5.05e-05
2L_18758119_SNP 5.06e-05
3R_8087122_SNP svp INTRON 0 5.22e-05
3R_8087122_SNP CG44037 INTRON 0 5.22e-05
2L_18753902_SNP 5.28e-05
2L_12384172_SNP bru-2 INTRON 0 5.31e-05
3R_7950239_SNP CG4702 INTRON 0 5.40e-05
2L_8274876_DEL Btk29A INTRON 0 5.42e-05
X_3381344_SNP CR44999 INTRON 0 5.55e-05
X_3381344_SNP CG10803 SYNONYMOUS_CODING 0 5.55e-05
X_3382189_SNP CG10803 SYNONYMOUS_CODING 0 5.67e-05
X_3382189_SNP CR44999 INTRON 0 5.67e-05
2L_19425002_SNP Pax INTRON 0 5.85e-05
2L_19425002_SNP CG16771 INTRON 0 5.85e-05
3L_22152549_DEL olf413 INTRON 0 5.86e-05
3L_14152551_SNP 5.93e-05
2L_15220356_SNP 5.99e-05
2L_19422021_SNP Pax INTRON 0 6.08e-05
3R_8103955_SNP svp INTRON 0 6.10e-05
3R_19830988_DEL KrT95D INTRON 0 6.28e-05
2L_19416856_SNP Pax INTRON 0 6.50e-05
2L_19416856_SNP Lectin-galC1 UPSTREAM 591 6.50e-05
3R_24089238_SNP CG43125 NON_SYNONYMOUS_CODING 0 6.51e-05
3R_24089238_SNP CG43124 DOWNSTREAM 355 6.51e-05
X_13014365_SNP CG42237 INTRON 0 6.67e-05
3L_9575411_SNP CG42673 INTRON 0 6.69e-05
3R_20196586_SNP CG17782 NON_SYNONYMOUS_CODING 0 6.84e-05
3R_20196586_SNP CG13614 DOWNSTREAM 133 6.84e-05
2R_3514811_SNP CG43340 INTRON 0 6.88e-05
2L_19429387_SNP CG13085 INTRON 0 6.91e-05
2L_19429387_SNP CG16771 DOWNSTREAM 163 6.91e-05
2L_6742211_SNP CG11221 UPSTREAM 291 7.01e-05
X_9642410_SNP Sp1 INTRON 0 7.15e-05
X_731454_SNP CG43867 INTRON 0 7.22e-05
2R_17565035_SNP CG30263 SYNONYMOUS_CODING 0 7.24e-05
3L_19857214_SNP 7.27e-05
3L_14412291_SNP bbg INTRON 0 7.36e-05
3L_3050532_SNP CG32485 UTR_5_PRIME 0 7.37e-05
3L_3050532_SNP Sk2 DOWNSTREAM 373 7.37e-05
3L_5608245_SNP 7.42e-05
3L_843314_SNP Gr61a INTRON 0 7.42e-05
3L_843314_SNP CG13889 UPSTREAM 612 7.42e-05
X_3381915_SNP CG10803 SYNONYMOUS_CODING 0 7.57e-05
X_3381915_SNP CR44999 INTRON 0 7.57e-05
2R_17584882_SNP HmgZ DOWNSTREAM 111 7.74e-05
2R_17584882_SNP CngB UPSTREAM 225 7.74e-05
X_5671081_SNP CG42699 INTRON 0 7.76e-05
X_5671081_SNP CG3108 DOWNSTREAM 147 7.76e-05
2L_12339479_SNP CG31862 DOWNSTREAM 2 7.87e-05
2L_6742224_DEL CG11221 UPSTREAM 277 7.95e-05
2L_6742213_DEL CG11221 UPSTREAM 288 8.21e-05
3R_16565056_SNP CG17267 UPSTREAM 234 8.26e-05
3R_16565056_SNP CG42322 UPSTREAM 774 8.26e-05
3L_8918810_SNP Tsp66E INTRON 0 8.27e-05
3L_16156405_SNP CG5151 INTRON 0 8.30e-05
2R_10330586_SNP Oaz INTRON 0 8.31e-05
2L_14915314_SNP CG42313 INTRON 0 8.33e-05
3R_22504708_SNP beat-VII INTRON 0 8.34e-05
3L_6589428_SNP ndl NON_SYNONYMOUS_CODING 0 8.41e-05
3L_10498413_SNP A2bp1 INTRON 0 8.48e-05
3L_10498416_MNP A2bp1 INTRON 0 8.48e-05
3L_8624605_SNP Zasp66 INTRON 0 8.54e-05
3L_8624605_SNP Cdc6 DOWNSTREAM 4 8.54e-05
2R_17588521_MNP HmgZ INTRON 0 8.63e-05
2R_17588521_MNP HmgD UPSTREAM 442 8.63e-05
2R_7460403_SNP 8.63e-05
3L_920622_SNP Glut1 INTRON 0 8.69e-05
2L_15220342_INS 8.70e-05
X_7994327_SNP CG2258 INTRON 0 8.71e-05
3L_9061593_SNP CG4911 UTR_3_PRIME 0 8.76e-05
3R_24785872_SNP CG14521 INTRON 0 8.77e-05
X_8790818_SNP Moe INTRON 0 8.79e-05
X_8790829_SNP Moe INTRON 0 8.79e-05
2R_6417213_SNP lola INTRON 0 8.84e-05
3L_19200340_SNP fz2 INTRON 0 8.85e-05
X_3382150_SNP CR44999 INTRON 0 8.86e-05
X_3382150_SNP CG10803 SYNONYMOUS_CODING 0 8.86e-05
3L_14691172_SNP CG17177 NON_SYNONYMOUS_CODING 0 8.94e-05
3L_14691172_SNP ome INTRON 0 8.94e-05
3L_2402512_SNP CG45186 INTRON 0 9.00e-05
2R_17082950_SNP Lapsyn INTRON 0 9.03e-05
3R_8110301_SNP svp INTRON 0 9.11e-05
3R_17167115_SNP CG16791 INTRON 0 9.12e-05
X_7994276_SNP CG2258 INTRON 0 9.26e-05
2R_10344322_SNP Oaz INTRON 0 9.29e-05
2R_6426324_SNP lola INTRON 0 9.38e-05
2R_6419048_SNP lola DOWNSTREAM 111 9.42e-05
2L_2552957_SNP CG3515 UPSTREAM 132 9.43e-05
X_7994535_SNP CG2258 INTRON 0 9.46e-05
2R_10615404_SNP 9.56e-05
2L_12339547_SNP CG31862 DOWNSTREAM 70 9.60e-05
3R_27479386_SNP kek6 INTRON 0 9.97e-05

1.4.3.2 Feature count

feature n
INTRON 152
DOWNSTREAM 22
UPSTREAM 16
SYNONYMOUS_CODING 13
NON_SYNONYMOUS_CODING 7
UTR_3_PRIME 3
UTR_5_PRIME 2

1.4.3.3 Gene counts

gene n
Oaz 23
CG16771 14
CG10803 12
CR44999 12
CG13085 11
CG31862 7
lola 6
Pax 5
olf413 4
bbg 3
beat-VII 3
bru-2 3
CG11221 3
CG13936 3
CG2258 3
CG30263 3
dpr8 3
sbr 3
svp 3
A2bp1 2
CG15209 2
CG34127 2
CG42673 2
CG4702 2
CG5151 2
Grip 2
HmgZ 2
iab-8 2
Moe 2
twin 2
Ac13E 1
Baldspot 1
beat-Ia 1
Btk29A 1
Cdc6 1
CG10237 1
CG13614 1
CG13889 1
CG14253 1
CG14521 1
CG16791 1
CG17177 1
CG17267 1
CG17782 1
CG30160 1
CG3108 1
CG32082 1
CG32250 1
CG32485 1
CG33752 1
CG33772 1
CG33970 1
CG3515 1
CG3919 1
CG42237 1
CG42313 1
CG42322 1
CG42699 1
CG42741 1
CG43124 1
CG43125 1
CG43143 1
CG43340 1
CG43867 1
CG44037 1
CG45186 1
CG4911 1
CG5639 1
Claspin 1
CngB 1
Cngl 1
disco-r 1
fra 1
fz 1
fz2 1
Glut1 1
Gr61a 1
HmgD 1
Ipod 1
kek6 1
KrT95D 1
Lapsyn 1
Lectin-galC1 1
ndl 1
ome 1
Prosap 1
ptc 1
raps 1
Rassf 1
Sk2 1
sls 1
snRNA:U12:73B 1
Sp1 1
Src64B 1
Ten-m 1
Tsp42Ec 1
Tsp66E 1
twi 1
Zasp66 1

1.4.4 CTmin

1.4.4.1 All hits

ID gene feature Distance to gene AvgMixedPval
2R_20313579_SNP prom INTRON 0 0.00e+00
2R_20313579_SNP CG42383 UPSTREAM 954 0.00e+00
X_4385442_SNP CR32773 INTRON 0 1.00e-07
3R_13900959_SNP 2.00e-07
2R_20308502_SNP prom INTRON 0 4.00e-07
3R_12992895_SNP Mur89F INTRON 0 7.00e-07
2R_20313917_SNP prom INTRON 0 9.00e-07
2R_20313922_DEL prom INTRON 0 9.00e-07
2R_20313930_SNP prom INTRON 0 9.00e-07
2R_20313933_SNP prom INTRON 0 9.00e-07
2R_20313935_INS prom INTRON 0 9.00e-07
2R_20313938_SNP prom INTRON 0 9.00e-07
2R_20313940_MNP prom INTRON 0 9.00e-07
2R_20308558_SNP prom INTRON 0 1.00e-06
2R_20250118_SNP bs INTRON 0 1.00e-06
2R_20250118_SNP CR44811 INTRON 0 1.00e-06
2R_20301097_SNP CG45068 SYNONYMOUS_CODING 0 1.10e-06
2R_20301097_SNP CG45069 UTR_5_PRIME 0 1.10e-06
2R_20301239_SNP CG45068 NON_SYNONYMOUS_CODING 0 1.10e-06
2R_20301239_SNP CG45069 UTR_5_PRIME 0 1.10e-06
2R_20308533_SNP prom INTRON 0 1.20e-06
2R_20313914_SNP prom INTRON 0 1.30e-06
2L_2612712_SNP 1.40e-06
2R_20313927_SNP prom INTRON 0 1.50e-06
2R_20313911_SNP prom INTRON 0 1.80e-06
2R_20307893_SNP prom NON_SYNONYMOUS_CODING 0 1.80e-06
2R_20313916_SNP prom INTRON 0 1.90e-06
2R_20308565_SNP prom INTRON 0 1.90e-06
2R_20309964_SNP prom INTRON 0 2.00e-06
2R_20309106_SNP prom INTRON 0 2.20e-06
3R_11364111_SNP CG18519 SYNONYMOUS_CODING 0 2.20e-06
2R_20313919_SNP prom INTRON 0 2.40e-06
3R_14850882_SNP CG14285 NON_SYNONYMOUS_CODING 0 3.10e-06
3R_14850882_SNP CG14286 DOWNSTREAM 307 3.10e-06
2R_20313912_SNP prom INTRON 0 3.20e-06
2L_3465546_SNP msl-2 NON_SYNONYMOUS_CODING 0 3.20e-06
2L_3465546_SNP Pdsw UPSTREAM 611 3.20e-06
2R_20301123_SNP CG45069 UTR_5_PRIME 0 3.30e-06
2R_20301123_SNP CG45068 NON_SYNONYMOUS_CODING 0 3.30e-06
3R_13552400_SNP Lgr1 INTRON 0 3.60e-06
3R_11367299_SNP CG18519 NON_SYNONYMOUS_CODING 0 4.00e-06
3R_11288771_SNP AdamTS-A INTRON 0 4.20e-06
2R_20301091_SNP CG45069 UTR_5_PRIME 0 4.20e-06
2R_20301091_SNP CG45068 SYNONYMOUS_CODING 0 4.20e-06
2R_12301745_SNP Sema-2b INTRON 0 4.20e-06
2R_12301745_SNP Menl-2 DOWNSTREAM 575 4.20e-06
3R_12990694_SNP Mur89F INTRON 0 4.30e-06
2R_20309307_SNP prom INTRON 0 4.80e-06
3R_9949217_SNP twf SYNONYMOUS_CODING 0 5.60e-06
3R_9949217_SNP 140up DOWNSTREAM 668 5.60e-06
3R_13002842_SNP Mur89F INTRON 0 5.70e-06
2R_20309122_SNP prom INTRON 0 5.80e-06
3R_12997215_SNP Mur89F INTRON 0 6.00e-06
2L_3396579_SNP CR44792 DOWNSTREAM 744 6.60e-06
2L_3396577_SNP CR44792 DOWNSTREAM 746 6.70e-06
3R_13552010_SNP Lgr1 INTRON 0 6.70e-06
3L_4694662_SNP CG15876 SYNONYMOUS_CODING 0 7.50e-06
3L_4694662_SNP RhoGEF64C INTRON 0 7.50e-06
X_5639729_SNP IntS6 INTRON 0 7.50e-06
2L_2612282_INS CG15395 DOWNSTREAM 1000 7.60e-06
2R_7024700_SNP BBS4 SYNONYMOUS_CODING 0 7.80e-06
2R_20313809_SNP prom INTRON 0 9.00e-06
3L_5853164_SNP 9.60e-06
2L_3885863_SNP capu INTRON 0 9.70e-06
2R_20263633_SNP bs UTR_3_PRIME 0 1.07e-05
3L_8696154_SNP 1.07e-05
2R_20308557_SNP prom INTRON 0 1.08e-05
2R_20313929_SNP prom INTRON 0 1.11e-05
2L_14847936_SNP CG15279 INTRON 0 1.17e-05
X_4385623_SNP CR32773 INTRON 0 1.19e-05
3R_11388164_SNP 1.22e-05
2R_15691303_SNP 1.23e-05
2R_20314643_SNP prom INTRON 0 1.26e-05
3L_14188075_SNP nuf INTRON 0 1.30e-05
2R_20250001_SNP bs INTRON 0 1.37e-05
2R_20250001_SNP CR44811 INTRON 0 1.37e-05
2R_10963282_SNP 1.40e-05
X_12403029_SNP CG2556 INTRON 0 1.43e-05
2R_3769346_SNP Dgk UTR_5_PRIME 0 1.45e-05
3R_5901971_SNP CG5361 UPSTREAM 876 1.48e-05
2L_18774061_SNP ham INTRON 0 1.49e-05
2L_18774061_SNP CR43804 UPSTREAM 224 1.49e-05
2R_20308551_SNP prom INTRON 0 1.51e-05
2R_20306042_SNP prom INTRON 0 1.52e-05
2R_17037739_INS CG30389 INTRON 0 1.55e-05
X_14518598_SNP NetA INTRON 0 1.55e-05
X_6270410_SNP 1.55e-05
3R_12435590_SNP NPF INTRON 0 1.58e-05
3R_12992188_SNP Mur89F INTRON 0 1.61e-05
3L_7002933_SNP Mp INTRON 0 1.80e-05
2R_20280640_SNP slik DOWNSTREAM 561 1.81e-05
X_14991195_SNP Rab3-GEF INTRON 0 1.83e-05
3R_12571587_SNP bxd EXON 0 1.85e-05
3R_9755267_SNP 1.85e-05
X_14994016_SNP Rab3-GEF SYNONYMOUS_CODING 0 1.85e-05
3R_12997318_SNP Mur89F INTRON 0 2.01e-05
2R_20263506_SNP bs NON_SYNONYMOUS_CODING 0 2.02e-05
2R_20263738_SNP bs UTR_3_PRIME 0 2.02e-05
2R_20263740_INS bs UTR_3_PRIME 0 2.02e-05
2R_20263742_SNP bs UTR_3_PRIME 0 2.02e-05
2L_14861293_SNP 2.04e-05
2R_12971842_SNP CG30460 INTRON 0 2.08e-05
2R_3772050_SNP Dgk INTRON 0 2.10e-05
3R_11382934_SNP 2.12e-05
2R_20233630_SNP bs INTRON 0 2.14e-05
X_4385497_SNP CR32773 INTRON 0 2.14e-05
2R_20304475_SNP prom DOWNSTREAM 475 2.18e-05
2R_20313932_SNP prom INTRON 0 2.19e-05
3R_11367274_SNP CG18519 SYNONYMOUS_CODING 0 2.22e-05
3R_11367340_SNP CG18519 SYNONYMOUS_CODING 0 2.22e-05
3R_11367346_SNP CG18519 SYNONYMOUS_CODING 0 2.22e-05
3R_11423065_SNP 2.25e-05
2R_20257701_SNP bs INTRON 0 2.30e-05
2R_20257701_SNP CR44811 UPSTREAM 489 2.30e-05
2R_20303569_SNP prom INTRON 0 2.30e-05
2R_20303569_SNP CG45068 DOWNSTREAM 751 2.30e-05
2L_14829539_SNP 2.36e-05
2R_20252998_SNP CR44811 INTRON 0 2.36e-05
2R_20252998_SNP bs INTRON 0 2.36e-05
2L_16629322_SNP CG42389 INTRON 0 2.42e-05
2L_16629322_SNP CR44151 UPSTREAM 149 2.42e-05
2R_20280846_SNP slik DOWNSTREAM 355 2.43e-05
X_9640945_SNP Sp1 INTRON 0 2.43e-05
3R_9755266_SNP 2.54e-05
2R_17103833_SNP CG15661 SYNONYMOUS_CODING 0 2.55e-05
3R_12041136_SNP CR45641 DOWNSTREAM 457 2.58e-05
X_5908964_SNP CR44499 DOWNSTREAM 912 2.58e-05
2R_20308522_SNP prom INTRON 0 2.69e-05
2R_20257613_SNP bs INTRON 0 2.70e-05
2R_20257613_SNP CR44811 UPSTREAM 401 2.70e-05
3R_5905483_SNP 2.70e-05
3R_19770578_SNP CG12268 INTRON 0 2.74e-05
3R_19770583_SNP CG12268 INTRON 0 2.74e-05
3R_19770588_SNP CG12268 INTRON 0 2.74e-05
3R_12996262_SNP Mur89F INTRON 0 2.82e-05
3R_4247244_SNP CG45263 INTRON 0 2.83e-05
3R_4247244_SNP Obp85a UPSTREAM 925 2.83e-05
3R_9755188_SNP 2.85e-05
2L_1964167_SNP erm INTRON 0 2.87e-05
3L_3637779_SNP dar1 INTRON 0 2.88e-05
3R_11422476_INS 2.88e-05
2R_6825968_SNP Spn47C UTR_3_PRIME 0 2.89e-05
2R_20280809_SNP slik DOWNSTREAM 392 2.96e-05
3R_9949202_SNP twf SYNONYMOUS_CODING 0 2.97e-05
3R_9949202_SNP 140up DOWNSTREAM 683 2.97e-05
3R_12992004_SNP Mur89F INTRON 0 2.98e-05
3R_12991699_SNP Mur89F INTRON 0 3.03e-05
X_7604829_INS 3.04e-05
3L_2010684_SNP CR44535 EXON 0 3.13e-05
2L_14781915_SNP CR15280 EXON 0 3.24e-05
2R_20313730_SNP prom INTRON 0 3.24e-05
3R_13524790_SNP osa INTRON 0 3.26e-05
2R_20260408_SNP bs INTRON 0 3.32e-05
2R_20306197_SNP prom SYNONYMOUS_CODING 0 3.34e-05
2R_12696827_SNP 3.35e-05
3R_5285535_SNP GstZ2 INTRON 0 3.36e-05
X_14993421_SNP Rab3-GEF INTRON 0 3.38e-05
X_9662105_SNP 3.43e-05
2R_14565483_DEL CG44434 DOWNSTREAM 701 3.45e-05
2R_14565483_DEL CG44435 DOWNSTREAM 701 3.45e-05
2R_20296526_SNP SerT SYNONYMOUS_CODING 0 3.51e-05
3R_11400768_SNP 3.51e-05
3R_12992053_DEL Mur89F INTRON 0 3.53e-05
3R_11363907_SNP CG18519 SYNONYMOUS_CODING 0 3.58e-05
3R_11363907_SNP CG18522 UPSTREAM 893 3.58e-05
2L_1090401_SNP CG4629 INTRON 0 3.60e-05
2R_1991490_SNP EcR INTRON 0 3.60e-05
2R_1991491_SNP EcR INTRON 0 3.60e-05
3R_12023256_SNP sra UTR_3_PRIME 0 3.72e-05
3R_12023256_SNP CG6126 DOWNSTREAM 466 3.72e-05
3R_17772582_SNP 3.73e-05
2R_17983519_SNP CG11073 INTRON 0 3.78e-05
2R_20269748_SNP mAChR-A INTRON 0 3.81e-05
2L_5945189_SNP Gpdh INTRON 0 3.86e-05
3L_3812775_SNP CG12006 SYNONYMOUS_CODING 0 3.86e-05
2L_14829550_SNP 3.88e-05
2L_14861303_SNP 3.90e-05
3L_12306383_SNP 3.90e-05
2R_10963284_SNP 3.96e-05
3L_4254140_SNP ago UPSTREAM 88 3.98e-05
3L_4254140_SNP CG1265 UPSTREAM 636 3.98e-05
2L_5613850_SNP CG14010 INTRON 0 4.01e-05
2L_2601212_SNP CR44789 EXON 0 4.04e-05
2R_20258747_SNP bs INTRON 0 4.07e-05
3R_11405546_SNP 4.24e-05
3R_11411525_SNP 4.28e-05
3R_11425747_SNP 4.31e-05
X_18167335_SNP 4.40e-05
2L_14849951_SNP CG15279 INTRON 0 4.44e-05
2R_12704274_SNP CG5550 SYNONYMOUS_CODING 0 4.44e-05
2R_12704274_SNP CR43417 DOWNSTREAM 750 4.44e-05
3L_4694906_SNP RhoGEF64C INTRON 0 4.44e-05
3L_4694906_SNP CG15876 UPSTREAM 61 4.44e-05
2R_1618770_SNP 4.47e-05
2R_20306103_SNP prom INTRON 0 4.48e-05
3R_12996121_SNP Mur89F INTRON 0 4.64e-05
X_12899932_SNP rad INTRON 0 4.64e-05
3R_9755209_INS 4.69e-05
X_14994013_SNP Rab3-GEF SYNONYMOUS_CODING 0 4.71e-05
X_14994019_SNP Rab3-GEF SYNONYMOUS_CODING 0 4.71e-05
3R_13928920_SNP sr INTRON 0 4.73e-05
3L_997191_SNP trio DOWNSTREAM 19 4.76e-05
3L_4254108_SNP ago INTRON 0 4.78e-05
3L_4254108_SNP CG1265 UPSTREAM 668 4.78e-05
3R_11420351_SNP 4.82e-05
3R_11420344_SNP 4.83e-05
2L_5964548_SNP psd INTRON 0 4.87e-05
2L_5964548_SNP CG13992 DOWNSTREAM 843 4.87e-05
3R_9755183_INS 4.87e-05
3R_12996202_SNP Mur89F INTRON 0 4.91e-05
2R_12628367_SNP 4.92e-05
3L_3812970_SNP CG12006 SYNONYMOUS_CODING 0 4.94e-05
X_18251508_DEL 4.94e-05
X_3945990_SNP 5.00e-05
2R_20257397_SNP bs INTRON 0 5.01e-05
2R_20257397_SNP CR44811 UPSTREAM 185 5.01e-05
2L_14839600_SNP CR43805 DOWNSTREAM 834 5.07e-05
2R_5227902_SNP CG13954 INTRON 0 5.08e-05
2R_5227902_SNP CG13739 INTRON 0 5.08e-05
3R_12992010_SNP Mur89F INTRON 0 5.11e-05
3R_12996231_DEL Mur89F INTRON 0 5.17e-05
3R_19565063_SNP Hmgcr INTRON 0 5.18e-05
4_212564_SNP CG2316 INTRON 0 5.18e-05
3R_10974341_SNP 5.24e-05
2L_8257947_SNP Btk29A DOWNSTREAM 426 5.27e-05
2L_8257947_SNP CG8086 UPSTREAM 445 5.27e-05
3R_9755264_SNP 5.32e-05
3R_11384632_SNP 5.36e-05
3L_12833443_SNP CG10960 INTRON 0 5.37e-05
X_18915078_SNP CG43759 INTRON 0 5.38e-05
2L_3013371_SNP CG17265 INTRON 0 5.49e-05
3L_16500200_SNP CG43373 INTRON 0 5.52e-05
2R_20276477_SNP mAChR-A INTRON 0 5.61e-05
3L_8207415_SNP CG8006 DOWNSTREAM 693 5.61e-05
3L_8207415_SNP CG8012 UPSTREAM 965 5.61e-05
2R_9189361_DEL CG17047 DOWNSTREAM 310 5.62e-05
X_14993547_SNP Rab3-GEF INTRON 0 5.63e-05
2L_5867252_SNP rau INTRON 0 5.64e-05
2L_1430353_SNP 5.65e-05
2R_20298783_SNP SerT UPSTREAM 186 5.67e-05
2R_20298783_SNP CG45068 UPSTREAM 610 5.67e-05
2R_20301145_SNP CG45068 SYNONYMOUS_CODING 0 5.70e-05
2R_20301145_SNP CG45069 UTR_5_PRIME 0 5.70e-05
2R_3551128_SNP CG2065 UPSTREAM 163 5.71e-05
2R_3551128_SNP CG2070 DOWNSTREAM 215 5.71e-05
3L_11835004_SNP 5.72e-05
X_6297829_SNP 5.74e-05
2L_14839047_SNP 5.78e-05
2L_14839838_SNP CR43805 DOWNSTREAM 596 5.78e-05
2R_17118453_SNP ASPP INTRON 0 5.88e-05
2R_20263548_SNP bs UTR_3_PRIME 0 5.91e-05
3R_11405178_SNP 5.92e-05
3R_12989857_SNP Mur89F INTRON 0 5.92e-05
X_18167373_DEL 5.92e-05
2L_14839629_INS CR43805 DOWNSTREAM 804 5.96e-05
2R_20300858_SNP CG45068 SYNONYMOUS_CODING 0 5.98e-05
2R_20300858_SNP CG45069 START_GAINED 0 5.98e-05
3R_13900852_SNP 6.03e-05
3R_13900177_SNP 6.08e-05
X_18251504_SNP 6.09e-05
X_18251505_SNP 6.09e-05
3R_11420325_SNP 6.24e-05
3L_4254603_DEL CG1265 UPSTREAM 172 6.26e-05
3L_4254603_DEL ago UPSTREAM 298 6.26e-05
2R_9926382_SNP mam SYNONYMOUS_CODING 0 6.31e-05
3R_11420346_SNP 6.32e-05
3R_11402243_SNP 6.37e-05
3R_12996042_SNP Mur89F INTRON 0 6.39e-05
2R_17798495_SNP Fili INTRON 0 6.40e-05
2L_14840839_SNP CR43805 DOWNSTREAM 642 6.45e-05
3R_11425064_SNP 6.45e-05
2R_12628349_SNP 6.46e-05
2R_16139285_SNP CG9864 INTRON 0 6.51e-05
2R_20258970_SNP bs INTRON 0 6.51e-05
3R_11420330_SNP 6.52e-05
3R_11422667_SNP 6.52e-05
2R_12009356_SNP Jhe NON_SYNONYMOUS_CODING 0 6.54e-05
X_7588127_SNP CHES-1-like INTRON 0 6.66e-05
3R_5724642_SNP Glut4EF INTRON 0 6.72e-05
3R_24617170_SNP intr UTR_3_PRIME 0 6.75e-05
3R_24617170_SNP CG34295 DOWNSTREAM 965 6.75e-05
3R_19770553_SNP CG12268 INTRON 0 6.76e-05
2R_19373351_SNP CG43795 INTRON 0 6.81e-05
3R_12988032_SNP Mur89F INTRON 0 6.82e-05
3R_11367310_SNP CG18519 NON_SYNONYMOUS_CODING 0 6.84e-05
X_18252257_DEL CG6106 UPSTREAM 657 6.92e-05
3L_4671269_SNP axo INTRON 0 7.01e-05
2R_10962869_SNP 7.03e-05
3R_12996058_SNP Mur89F INTRON 0 7.07e-05
2R_3772313_SNP Dgk INTRON 0 7.10e-05
3L_13383636_SNP Poc1 UPSTREAM 530 7.10e-05
2R_18750111_SNP 7.21e-05
X_18252738_DEL CG6106 UPSTREAM 176 7.21e-05
X_18252748_SNP CG6106 UPSTREAM 166 7.21e-05
2L_14847382_SNP CG15279 INTRON 0 7.26e-05
2R_6825911_SNP Spn47C DOWNSTREAM 19 7.26e-05
3R_11420431_DEL 7.26e-05
2R_9208823_SNP 7.29e-05
X_5631703_INS CG32758 UTR_5_PRIME 0 7.32e-05
X_5631703_INS IntS6 DOWNSTREAM 992 7.32e-05
2L_14840782_SNP CR43805 DOWNSTREAM 699 7.33e-05
2L_14840900_SNP CR43805 DOWNSTREAM 581 7.33e-05
3R_11347985_SNP 7.35e-05
3R_11355047_SNP CG31296 DOWNSTREAM 747 7.36e-05
X_16295460_SNP CG9981 SYNONYMOUS_CODING 0 7.45e-05
X_18167332_SNP 7.47e-05
2L_1264510_SNP robo3 INTRON 0 7.48e-05
2R_13598343_SNP CG6424 INTRON 0 7.51e-05
2L_20784197_SNP 7.52e-05
3R_9755191_SNP 7.56e-05
3R_9755213_SNP 7.60e-05
2R_20253495_SNP CR44811 INTRON 0 7.63e-05
2R_20253495_SNP bs INTRON 0 7.63e-05
3R_11367384_SNP CG18519 NON_SYNONYMOUS_CODING 0 7.63e-05
2L_1611896_SNP CG14352 INTRON 0 7.65e-05
2L_1611896_SNP RFeSP DOWNSTREAM 533 7.65e-05
X_12346699_SNP Pkcdelta INTRON 0 7.65e-05
2R_19373299_SNP CG43795 INTRON 0 7.69e-05
2L_14850088_SNP CG15279 INTRON 0 7.76e-05
3R_12959441_SNP CG31266 UTR_3_PRIME 0 7.84e-05
3R_12959441_SNP CG31267 UPSTREAM 478 7.84e-05
3R_12998775_SNP Mur89F INTRON 0 7.88e-05
3R_11420305_SNP 7.93e-05
2R_20305957_SNP prom INTRON 0 7.95e-05
2L_5942852_SNP Sfp26Ad SYNONYMOUS_CODING 0 7.99e-05
2L_5942852_SNP CR45289 DOWNSTREAM 268 7.99e-05
3L_18019988_SNP Eip75B INTRON 0 8.11e-05
3L_9933694_SNP CG34356 INTRON 0 8.16e-05
2R_12628403_SNP 8.20e-05
3R_9755255_SNP 8.20e-05
X_3945994_SNP 8.25e-05
3R_6961146_SNP 8.26e-05
2R_10221274_SNP Shroom INTRON 0 8.41e-05
3R_12733232_SNP iab-8 INTRON 0 8.42e-05
3R_12733233_SNP iab-8 INTRON 0 8.42e-05
3R_12733519_SNP iab-8 INTRON 0 8.42e-05
3R_11420324_SNP 8.45e-05
2R_20275800_SNP mAChR-A INTRON 0 8.46e-05
3R_14277461_SNP fru INTRON 0 8.46e-05
2L_14861260_SNP 8.49e-05
X_3256422_SNP 8.50e-05
X_3256427_SNP 8.50e-05
3L_7607016_SNP CG33275 INTRON 0 8.52e-05
3L_9760566_SNP CG8177 INTRON 0 8.56e-05
2R_16825523_SNP Rx DOWNSTREAM 988 8.57e-05
3L_9933685_SNP CG34356 INTRON 0 8.58e-05
3R_11424706_SNP 8.60e-05
2R_3772109_INS Dgk INTRON 0 8.63e-05
3R_12317718_SNP Cad89D SYNONYMOUS_CODING 0 8.63e-05
2R_20261326_SNP bs INTRON 0 8.69e-05
2R_20261326_SNP tRNA:N5:60C UPSTREAM 260 8.69e-05
3R_11387717_SNP 8.69e-05
X_14991448_SNP Rab3-GEF INTRON 0 8.80e-05
2R_20284940_SNP slik SYNONYMOUS_CODING 0 8.82e-05
2R_20260586_SNP bs INTRON 0 8.86e-05
2R_20260586_SNP tRNA:N5:60C UPSTREAM 1000 8.86e-05
X_14993353_SNP Rab3-GEF INTRON 0 8.87e-05
3L_14972722_INS CG3349 UTR_5_PRIME 0 8.90e-05
3R_12996167_SNP Mur89F INTRON 0 8.94e-05
3R_14287775_SNP fru INTRON 0 8.94e-05
3R_11388712_SNP 8.96e-05
2L_2782146_INS Syt1 UTR_3_PRIME 0 8.98e-05
X_14991551_SNP Rab3-GEF SYNONYMOUS_CODING 0 9.04e-05
3L_15704758_SNP 9.07e-05
2L_17027312_SNP 9.09e-05
2L_4353069_SNP CG15429 SYNONYMOUS_CODING 0 9.11e-05
3R_11292329_SNP AdamTS-A INTRON 0 9.16e-05
2R_12559097_DEL CG34457 UTR_3_PRIME 0 9.18e-05
2R_12559097_DEL CG34458 UPSTREAM 440 9.18e-05
2R_20276009_SNP mAChR-A INTRON 0 9.18e-05
2L_14858849_SNP 9.20e-05
2R_20264927_SNP CG13578 UPSTREAM 427 9.20e-05
2R_20264927_SNP bs DOWNSTREAM 931 9.20e-05
3L_12404345_SNP CG32103 INTRON 0 9.20e-05
3R_12989856_SNP Mur89F INTRON 0 9.22e-05
X_19504387_DEL CG14207 INTRON 0 9.33e-05
2R_10218531_SNP Shroom INTRON 0 9.35e-05
2L_8325829_SNP CG7781 UPSTREAM 420 9.38e-05
3L_17618385_SNP CG7510 INTRON 0 9.38e-05
3R_13332029_SNP Dscam3 UPSTREAM 640 9.38e-05
2R_3546887_SNP CG1339 SYNONYMOUS_CODING 0 9.40e-05
2R_3546887_SNP CG30495 DOWNSTREAM 321 9.40e-05
2R_16938611_SNP shg SYNONYMOUS_CODING 0 9.41e-05
3R_12992033_SNP Mur89F INTRON 0 9.45e-05
2L_9735509_SNP Nckx30C INTRON 0 9.47e-05
X_14991393_DEL Rab3-GEF INTRON 0 9.47e-05
3R_11379202_SNP CG18516 UPSTREAM 647 9.48e-05
2R_20277886_SNP mAChR-A UPSTREAM 69 9.51e-05
2R_20277886_SNP CR44813 UPSTREAM 414 9.51e-05
3R_11400817_SNP 9.64e-05
2L_14839669_SNP CR43805 DOWNSTREAM 765 9.70e-05
3R_11402209_SNP 9.76e-05
3R_12996226_SNP Mur89F INTRON 0 9.79e-05
3R_12396134_SNP CG42342 INTRON 0 9.90e-05
3L_3684685_DEL 9.93e-05
2L_21033767_SNP CG42238 INTRON 0 9.98e-05
2R_8722614_SNP 9.99e-05

1.4.4.2 Feature count

feature n
INTRON 171
DOWNSTREAM 40
UPSTREAM 35
SYNONYMOUS_CODING 31
UTR_3_PRIME 11
NON_SYNONYMOUS_CODING 10
UTR_5_PRIME 8
EXON 4
START_GAINED 1

1.4.4.3 Gene counts

gene n
prom 37
Mur89F 23
bs 20
Rab3-GEF 10
CG18519 8
CG45068 8
CR43805 7
CR44811 7
CG45069 6
mAChR-A 5
CG12268 4
CG15279 4
Dgk 4
slik 4
ago 3
CG1265 3
CG6106 3
CR32773 3
iab-8 3
140up 2
AdamTS-A 2
CG12006 2
CG15876 2
CG34356 2
CG43795 2
CR44792 2
EcR 2
fru 2
IntS6 2
Lgr1 2
RhoGEF64C 2
SerT 2
Shroom 2
Spn47C 2
tRNA:N5:60C 2
twf 2
ASPP 1
axo 1
BBS4 1
Btk29A 1
bxd 1
Cad89D 1
capu 1
CG10960 1
CG11073 1
CG1339 1
CG13578 1
CG13739 1
CG13954 1
CG13992 1
CG14010 1
CG14207 1
CG14285 1
CG14286 1
CG14352 1
CG15395 1
CG15429 1
CG15661 1
CG17047 1
CG17265 1
CG18516 1
CG18522 1
CG2065 1
CG2070 1
CG2316 1
CG2556 1
CG30389 1
CG30460 1
CG30495 1
CG31266 1
CG31267 1
CG31296 1
CG32103 1
CG32758 1
CG33275 1
CG3349 1
CG34295 1
CG34457 1
CG34458 1
CG42238 1
CG42342 1
CG42383 1
CG42389 1
CG43373 1
CG43759 1
CG44434 1
CG44435 1
CG45263 1
CG4629 1
CG5361 1
CG5550 1
CG6126 1
CG6424 1
CG7510 1
CG7781 1
CG8006 1
CG8012 1
CG8086 1
CG8177 1
CG9864 1
CG9981 1
CHES-1-like 1
CR15280 1
CR43417 1
CR43804 1
CR44151 1
CR44499 1
CR44535 1
CR44789 1
CR44813 1
CR45289 1
CR45641 1
dar1 1
Dscam3 1
Eip75B 1
erm 1
Fili 1
Glut4EF 1
Gpdh 1
GstZ2 1
ham 1
Hmgcr 1
intr 1
Jhe 1
mam 1
Menl-2 1
Mp 1
msl-2 1
Nckx30C 1
NetA 1
NPF 1
nuf 1
Obp85a 1
osa 1
Pdsw 1
Pkcdelta 1
Poc1 1
psd 1
rad 1
rau 1
RFeSP 1
robo3 1
Rx 1
Sema-2b 1
Sfp26Ad 1
shg 1
Sp1 1
sr 1
sra 1
Syt1 1
trio 1

1.4.5 Thermal Breadth

1.4.5.1 All hits

ID gene feature Distance to gene AvgMixedPval
3R_12992895_SNP Mur89F INTRON 0 1.00e-07
2R_20313579_SNP prom INTRON 0 6.00e-07
2R_20313579_SNP CG42383 UPSTREAM 954 6.00e-07
2R_7024700_SNP BBS4 SYNONYMOUS_CODING 0 8.00e-07
3R_13900959_SNP 1.30e-06
2R_20301097_SNP CG45068 SYNONYMOUS_CODING 0 1.40e-06
2R_20301097_SNP CG45069 UTR_5_PRIME 0 1.40e-06
2R_20301239_SNP CG45068 NON_SYNONYMOUS_CODING 0 1.40e-06
2R_20301239_SNP CG45069 UTR_5_PRIME 0 1.40e-06
2L_2612712_SNP 1.90e-06
3R_13552010_SNP Lgr1 INTRON 0 3.00e-06
2R_20301123_SNP CG45069 UTR_5_PRIME 0 3.30e-06
2R_20301123_SNP CG45068 NON_SYNONYMOUS_CODING 0 3.30e-06
2R_20301091_SNP CG45069 UTR_5_PRIME 0 3.40e-06
2R_20301091_SNP CG45068 SYNONYMOUS_CODING 0 3.40e-06
3R_5905483_SNP 3.60e-06
X_4385442_SNP CR32773 INTRON 0 4.30e-06
3R_13552400_SNP Lgr1 INTRON 0 4.50e-06
2L_20784197_SNP 5.60e-06
2L_3465546_SNP msl-2 NON_SYNONYMOUS_CODING 0 5.70e-06
2L_3465546_SNP Pdsw UPSTREAM 611 5.70e-06
3R_12991699_SNP Mur89F INTRON 0 6.10e-06
3R_12990694_SNP Mur89F INTRON 0 6.30e-06
3L_997191_SNP trio DOWNSTREAM 19 6.60e-06
3R_4488005_SNP p SYNONYMOUS_CODING 0 7.30e-06
3R_5901971_SNP CG5361 UPSTREAM 876 7.30e-06
X_18252257_DEL CG6106 UPSTREAM 657 8.10e-06
2R_20250118_SNP bs INTRON 0 9.40e-06
2R_20250118_SNP CR44811 INTRON 0 9.40e-06
X_5639729_SNP IntS6 INTRON 0 9.60e-06
3L_7002933_SNP Mp INTRON 0 1.01e-05
2R_17983519_SNP CG11073 INTRON 0 1.10e-05
3R_4487071_SNP p NON_SYNONYMOUS_CODING 0 1.11e-05
3R_4487071_SNP bel UPSTREAM 588 1.11e-05
2R_14565483_DEL CG44434 DOWNSTREAM 701 1.15e-05
2R_14565483_DEL CG44435 DOWNSTREAM 701 1.15e-05
2R_20308502_SNP prom INTRON 0 1.18e-05
2R_17103833_SNP CG15661 SYNONYMOUS_CODING 0 1.29e-05
3R_12997215_SNP Mur89F INTRON 0 1.29e-05
3R_17312898_SNP CG7922 SYNONYMOUS_CODING 0 1.31e-05
3R_12317718_SNP Cad89D SYNONYMOUS_CODING 0 1.33e-05
X_9640945_SNP Sp1 INTRON 0 1.33e-05
2R_11082462_SNP CG43829 UPSTREAM 452 1.39e-05
2L_14847936_SNP CG15279 INTRON 0 1.40e-05
3R_4247244_SNP CG45263 INTRON 0 1.45e-05
3R_4247244_SNP Obp85a UPSTREAM 925 1.45e-05
3R_12992188_SNP Mur89F INTRON 0 1.48e-05
X_18251508_DEL 1.49e-05
2L_18774061_SNP ham INTRON 0 1.53e-05
2L_18774061_SNP CR43804 UPSTREAM 224 1.53e-05
2R_20313919_SNP prom INTRON 0 1.53e-05
3R_17312919_SNP CG7922 SYNONYMOUS_CODING 0 1.60e-05
3R_12985727_SNP Mur89F INTRON 0 1.63e-05
2L_2612282_INS CG15395 DOWNSTREAM 1000 1.65e-05
2R_20313917_SNP prom INTRON 0 1.67e-05
2R_20313922_DEL prom INTRON 0 1.67e-05
2R_20313930_SNP prom INTRON 0 1.67e-05
2R_20313933_SNP prom INTRON 0 1.67e-05
2R_20313935_INS prom INTRON 0 1.67e-05
2R_20313938_SNP prom INTRON 0 1.67e-05
2R_20313940_MNP prom INTRON 0 1.67e-05
2R_20308565_SNP prom INTRON 0 1.69e-05
X_18251504_SNP 1.69e-05
X_18251505_SNP 1.69e-05
3L_4694906_SNP RhoGEF64C INTRON 0 1.71e-05
3L_4694906_SNP CG15876 UPSTREAM 61 1.71e-05
2R_17037739_INS CG30389 INTRON 0 1.72e-05
2R_1991490_SNP EcR INTRON 0 1.85e-05
2R_1991491_SNP EcR INTRON 0 1.85e-05
3L_12833443_SNP CG10960 INTRON 0 1.87e-05
2L_7751402_SNP CG7203 DOWNSTREAM 768 1.91e-05
3R_22095003_SNP CG6154 INTRON 0 1.91e-05
2R_20308558_SNP prom INTRON 0 1.92e-05
2L_9792840_SNP CG13123 INTRON 0 1.93e-05
2L_9792840_SNP nAChRalpha6 DOWNSTREAM 477 1.93e-05
3L_5853164_SNP 1.96e-05
3R_12992004_SNP Mur89F INTRON 0 2.03e-05
2R_5227902_SNP CG13954 INTRON 0 2.05e-05
2R_5227902_SNP CG13739 INTRON 0 2.05e-05
2R_3551128_SNP CG2065 UPSTREAM 163 2.07e-05
2R_3551128_SNP CG2070 DOWNSTREAM 215 2.07e-05
2R_3546887_SNP CG1339 SYNONYMOUS_CODING 0 2.09e-05
2R_3546887_SNP CG30495 DOWNSTREAM 321 2.09e-05
X_14994016_SNP Rab3-GEF SYNONYMOUS_CODING 0 2.11e-05
X_9641804_SNP Sp1 INTRON 0 2.12e-05
3R_19565063_SNP Hmgcr INTRON 0 2.13e-05
2R_20313914_SNP prom INTRON 0 2.16e-05
2R_20313927_SNP prom INTRON 0 2.16e-05
X_9641643_SNP Sp1 INTRON 0 2.17e-05
3R_9755267_SNP 2.25e-05
3R_9949217_SNP twf SYNONYMOUS_CODING 0 2.25e-05
3R_9949217_SNP 140up DOWNSTREAM 668 2.25e-05
X_12403029_SNP CG2556 INTRON 0 2.26e-05
3L_4694662_SNP CG15876 SYNONYMOUS_CODING 0 2.27e-05
3L_4694662_SNP RhoGEF64C INTRON 0 2.27e-05
2R_20308533_SNP prom INTRON 0 2.30e-05
X_9641727_SNP Sp1 INTRON 0 2.31e-05
3R_11367299_SNP CG18519 NON_SYNONYMOUS_CODING 0 2.32e-05
3R_13448666_DEL tRNA:CR33534 DOWNSTREAM 327 2.37e-05
3R_13448666_DEL CG14323 UPSTREAM 833 2.37e-05
3L_8696154_SNP 2.44e-05
2R_20313916_SNP prom INTRON 0 2.46e-05
X_7604829_INS 2.52e-05
3L_3844015_SNP 2.63e-05
3R_12992053_DEL Mur89F INTRON 0 2.66e-05
2R_20309106_SNP prom INTRON 0 2.67e-05
3R_12997318_SNP Mur89F INTRON 0 2.67e-05
2L_9508608_SNP CG33298 INTRON 0 2.71e-05
2L_1964167_SNP erm INTRON 0 2.72e-05
3L_16725026_SNP 2.81e-05
3R_12992010_SNP Mur89F INTRON 0 2.85e-05
2R_20313911_SNP prom INTRON 0 2.86e-05
X_18167373_DEL 2.88e-05
3R_13418241_SNP 2.89e-05
3R_24617170_SNP intr UTR_3_PRIME 0 2.93e-05
3R_24617170_SNP CG34295 DOWNSTREAM 965 2.93e-05
X_6297829_SNP 2.93e-05
3R_9755266_SNP 2.97e-05
3R_11388164_SNP 2.99e-05
2R_12230279_SNP CG7997 INTRON 0 3.02e-05
X_13151875_SNP mew INTRON 0 3.03e-05
X_13151875_SNP CG15742 NON_SYNONYMOUS_CODING 0 3.03e-05
2R_8502479_SNP CG45086 INTRON 0 3.05e-05
2R_8502479_SNP Galphaq INTRON 0 3.05e-05
3L_4694850_SNP RhoGEF64C INTRON 0 3.07e-05
3L_4694850_SNP CG15876 UPSTREAM 5 3.07e-05
3R_12992033_SNP Mur89F INTRON 0 3.07e-05
2L_3885863_SNP capu INTRON 0 3.08e-05
2R_7752530_SNP CG42531 DOWNSTREAM 84 3.09e-05
2R_7752530_SNP Damm DOWNSTREAM 151 3.09e-05
2L_7751417_SNP CG7203 DOWNSTREAM 753 3.10e-05
2L_5964548_SNP psd INTRON 0 3.13e-05
2L_5964548_SNP CG13992 DOWNSTREAM 843 3.13e-05
3R_13900177_SNP 3.14e-05
3R_13131971_SNP 3.19e-05
X_18167335_SNP 3.19e-05
X_7587146_DEL CHES-1-like INTRON 0 3.36e-05
X_3376568_SNP CR44999 INTRON 0 3.38e-05
X_3376568_SNP CG10804 UPSTREAM 213 3.38e-05
2R_20263548_SNP bs UTR_3_PRIME 0 3.40e-05
2L_7751376_SNP CG7203 DOWNSTREAM 794 3.41e-05
2L_7751399_SNP CG7203 DOWNSTREAM 771 3.42e-05
2R_12628367_SNP 3.46e-05
2R_7023942_SNP BBS4 INTRON 0 3.50e-05
2R_7023949_SNP BBS4 INTRON 0 3.50e-05
2R_7023958_SNP BBS4 INTRON 0 3.50e-05
2R_7023976_SNP BBS4 INTRON 0 3.50e-05
3R_17309679_SNP CG7922 NON_SYNONYMOUS_CODING 0 3.50e-05
2R_12369476_SNP 3.52e-05
X_18251526_SNP 3.53e-05
3R_4313545_SNP 3.54e-05
2L_5867252_SNP rau INTRON 0 3.61e-05
3R_13524790_SNP osa INTRON 0 3.61e-05
X_14993421_SNP Rab3-GEF INTRON 0 3.63e-05
2R_20263633_SNP bs UTR_3_PRIME 0 3.71e-05
3R_13332029_SNP Dscam3 UPSTREAM 640 3.71e-05
X_7588127_SNP CHES-1-like INTRON 0 3.74e-05
3R_11364111_SNP CG18519 SYNONYMOUS_CODING 0 3.75e-05
X_18251390_SNP 3.75e-05
2R_20307893_SNP prom NON_SYNONYMOUS_CODING 0 3.76e-05
3R_12435590_SNP NPF INTRON 0 3.76e-05
3R_19770578_SNP CG12268 INTRON 0 3.84e-05
3R_19770583_SNP CG12268 INTRON 0 3.84e-05
3R_19770588_SNP CG12268 INTRON 0 3.84e-05
3L_2294717_SNP MsR2 INTRON 0 3.86e-05
3R_11129613_SNP Tm1 INTRON 0 3.90e-05
X_6297782_SNP 3.98e-05
3R_5824500_SNP Spn85F NON_SYNONYMOUS_CODING 0 3.99e-05
3R_5824500_SNP CG5359 DOWNSTREAM 993 3.99e-05
X_18252264_SNP CG6106 UPSTREAM 650 4.04e-05
X_5631703_INS CG32758 UTR_5_PRIME 0 4.04e-05
X_5631703_INS IntS6 DOWNSTREAM 992 4.04e-05
3R_10655623_SNP btsz INTRON 0 4.07e-05
2L_7751543_DEL CG7203 DOWNSTREAM 626 4.08e-05
3L_2293540_SNP MsR2 INTRON 0 4.09e-05
2R_12628349_SNP 4.11e-05
3R_13002842_SNP Mur89F INTRON 0 4.12e-05
2R_12218440_SNP Vha44 INTRON 0 4.14e-05
3R_22094891_DEL CG6154 INTRON 0 4.17e-05
4_212564_SNP CG2316 INTRON 0 4.17e-05
3R_11288771_SNP AdamTS-A INTRON 0 4.21e-05
3L_3812775_SNP CG12006 SYNONYMOUS_CODING 0 4.23e-05
2R_7752475_SNP CG42531 DOWNSTREAM 29 4.24e-05
2R_7752475_SNP Damm DOWNSTREAM 206 4.24e-05
2R_8722614_SNP 4.28e-05
X_18252738_DEL CG6106 UPSTREAM 176 4.28e-05
X_18252748_SNP CG6106 UPSTREAM 166 4.28e-05
X_18251456_SNP 4.32e-05
2R_20309964_SNP prom INTRON 0 4.33e-05
2R_12628403_SNP 4.36e-05
2R_20263506_SNP bs NON_SYNONYMOUS_CODING 0 4.36e-05
2R_20263738_SNP bs UTR_3_PRIME 0 4.36e-05
2R_20263740_INS bs UTR_3_PRIME 0 4.36e-05
2R_20263742_SNP bs UTR_3_PRIME 0 4.36e-05
2R_20309307_SNP prom INTRON 0 4.37e-05
X_14994013_SNP Rab3-GEF SYNONYMOUS_CODING 0 4.37e-05
X_14994019_SNP Rab3-GEF SYNONYMOUS_CODING 0 4.37e-05
2R_2998199_SNP esn INTRON 0 4.46e-05
3R_22081036_SNP Ald DOWNSTREAM 652 4.46e-05
2R_20301145_SNP CG45068 SYNONYMOUS_CODING 0 4.47e-05
2R_20301145_SNP CG45069 UTR_5_PRIME 0 4.47e-05
3L_6639773_SNP 4.47e-05
2R_20313912_SNP prom INTRON 0 4.51e-05
3L_14197669_SNP nuf INTRON 0 4.54e-05
3L_14197669_SNP CG32141 DOWNSTREAM 275 4.54e-05
X_4985802_SNP CG15465 INTRON 0 4.56e-05
X_4985802_SNP rg INTRON 0 4.56e-05
3L_3329652_SNP CR45380 DOWNSTREAM 55 4.62e-05
3L_3329652_SNP CG14961 UPSTREAM 411 4.62e-05
3R_13419831_SNP CG7587 UPSTREAM 277 4.63e-05
2R_16825523_SNP Rx DOWNSTREAM 988 4.64e-05
3R_14850882_SNP CG14285 NON_SYNONYMOUS_CODING 0 4.64e-05
3R_14850882_SNP CG14286 DOWNSTREAM 307 4.64e-05
3L_3812970_SNP CG12006 SYNONYMOUS_CODING 0 4.66e-05
2L_3396579_SNP CR44792 DOWNSTREAM 744 4.67e-05
3R_17309591_SNP CG7922 INTRON 0 4.67e-05
3R_17314258_DEL 4.68e-05
X_12899932_SNP rad INTRON 0 4.68e-05
X_4986248_DEL CG15465 INTRON 0 4.74e-05
X_4986248_DEL rg INTRON 0 4.74e-05
2R_20269748_SNP mAChR-A INTRON 0 4.79e-05
2L_16699438_SNP grp NON_SYNONYMOUS_CODING 0 4.81e-05
2L_16699438_SNP CR43669 DOWNSTREAM 483 4.81e-05
2R_12451205_DEL DAT INTRON 0 4.81e-05
3L_7607016_SNP CG33275 INTRON 0 4.82e-05
3R_9755264_SNP 4.83e-05
2L_1611896_SNP CG14352 INTRON 0 4.85e-05
2L_1611896_SNP RFeSP DOWNSTREAM 533 4.85e-05
2R_14222653_DEL sbb INTRON 0 4.87e-05
2L_3396577_SNP CR44792 DOWNSTREAM 746 4.89e-05
3L_14092468_SNP 4.89e-05
3R_10974341_SNP 4.94e-05
X_5656121_SNP MAPk-Ak2 INTRON 0 4.94e-05
3L_9760566_SNP CG8177 INTRON 0 4.96e-05
X_20907278_SNP Ntf-2 INTRON 0 4.97e-05
X_20907279_SNP Ntf-2 INTRON 0 4.97e-05
3R_17309145_SNP CG7922 SYNONYMOUS_CODING 0 4.98e-05
2R_20313730_SNP prom INTRON 0 5.01e-05
2L_2592883_SNP CG15394 DOWNSTREAM 110 5.04e-05
3L_14188075_SNP nuf INTRON 0 5.09e-05
X_18167332_SNP 5.14e-05
3R_17313012_SNP CG7922 DOWNSTREAM 5 5.15e-05
2L_2612781_DEL 5.21e-05
2R_1618770_SNP 5.26e-05
X_14993547_SNP Rab3-GEF INTRON 0 5.29e-05
2L_14087933_SNP nAChRalpha5 INTRON 0 5.32e-05
2L_3013371_SNP CG17265 INTRON 0 5.32e-05
X_18251495_SNP 5.38e-05
3L_10374559_INS 5.47e-05
3L_12404345_SNP CG32103 INTRON 0 5.48e-05
2R_16825517_SNP Rx DOWNSTREAM 982 5.52e-05
2R_20260408_SNP bs INTRON 0 5.60e-05
3R_13421753_SNP Sgs5 UTR_3_PRIME 0 5.63e-05
3R_13421753_SNP CG7606 UPSTREAM 505 5.63e-05
2L_2612787_SNP 5.66e-05
2R_3769346_SNP Dgk UTR_5_PRIME 0 5.66e-05
X_7587379_SNP CHES-1-like INTRON 0 5.67e-05
3L_13974741_SNP CG17364 INTRON 0 5.74e-05
X_5908964_SNP CR44499 DOWNSTREAM 912 5.74e-05
3R_12985703_SNP Mur89F INTRON 0 5.79e-05
X_14994112_SNP Rab3-GEF SYNONYMOUS_CODING 0 5.81e-05
2R_19645190_SNP CG9850 INTRON 0 5.82e-05
X_9641716_SNP Sp1 INTRON 0 5.85e-05
3R_3439387_SNP CG34127 INTRON 0 5.86e-05
3R_12317562_SNP Cad89D INTRON 0 5.91e-05
3R_12317613_SNP Cad89D SYNONYMOUS_CODING 0 5.91e-05
X_9640876_SNP Sp1 INTRON 0 5.92e-05
X_9640960_SNP Sp1 INTRON 0 5.92e-05
2R_11632091_SNP CG30089 INTRON 0 5.98e-05
3R_13332023_DEL Dscam3 UPSTREAM 635 6.02e-05
3L_12544228_SNP sowah INTRON 0 6.04e-05
3R_10974468_SNP 6.10e-05
3R_19565035_SNP Hmgcr INTRON 0 6.10e-05
3R_19565036_SNP Hmgcr INTRON 0 6.10e-05
2R_20233630_SNP bs INTRON 0 6.16e-05
2R_19022154_SNP 6.27e-05
2R_20280846_SNP slik DOWNSTREAM 355 6.27e-05
3L_13935202_SNP CG32137 INTRON 0 6.35e-05
X_9210165_SNP CR44534 DOWNSTREAM 961 6.36e-05
2R_19551513_SNP Pde8 INTRON 0 6.37e-05
X_6443825_SNP CG34417 INTRON 0 6.44e-05
X_6444241_SNP CG34417 INTRON 0 6.44e-05
X_6446431_SNP CG34417 INTRON 0 6.44e-05
3L_18019988_SNP Eip75B INTRON 0 6.45e-05
3R_9949202_SNP twf SYNONYMOUS_CODING 0 6.45e-05
3R_9949202_SNP 140up DOWNSTREAM 683 6.45e-05
2R_7402770_SNP 6.47e-05
3R_12985546_SNP Mur89F SYNONYMOUS_CODING 0 6.50e-05
X_3945990_SNP 6.50e-05
3R_17313053_SNP CG7922 DOWNSTREAM 46 6.52e-05
3R_12992392_SNP Mur89F INTRON 0 6.53e-05
2R_11082631_SNP CG43829 UPSTREAM 621 6.56e-05
X_4986299_SNP rg INTRON 0 6.56e-05
X_4986299_SNP CG15465 INTRON 0 6.56e-05
2L_5613850_SNP CG14010 INTRON 0 6.58e-05
2R_20276009_SNP mAChR-A INTRON 0 6.63e-05
3L_17773480_SNP 6.66e-05
3R_12992032_SNP Mur89F INTRON 0 6.69e-05
X_14518598_SNP NetA INTRON 0 6.73e-05
2L_14847382_SNP CG15279 INTRON 0 6.75e-05
2R_7419910_SNP 6.80e-05
X_4986296_DEL rg INTRON 0 6.85e-05
X_4986296_DEL CG15465 INTRON 0 6.85e-05
3R_10655781_SNP btsz INTRON 0 6.88e-05
2R_12696827_SNP 7.02e-05
2R_20263539_SNP bs UTR_3_PRIME 0 7.04e-05
3R_13928920_SNP sr INTRON 0 7.14e-05
2L_9962482_SNP CG5850 SYNONYMOUS_CODING 0 7.15e-05
2L_9962482_SNP CR43683 DOWNSTREAM 378 7.15e-05
2R_17103509_SNP CG15661 SYNONYMOUS_CODING 0 7.15e-05
3R_17772582_SNP 7.17e-05
3R_12993769_SNP Mur89F INTRON 0 7.24e-05
4_214743_SNP CG2316 UPSTREAM 288 7.30e-05
4_214743_SNP CR44441 UPSTREAM 757 7.30e-05
X_14991195_SNP Rab3-GEF INTRON 0 7.35e-05
2R_7266548_SNP Tsp47F UTR_5_PRIME 0 7.37e-05
3R_19770553_SNP CG12268 INTRON 0 7.39e-05
3L_13379241_SNP CG10171 UTR_3_PRIME 0 7.40e-05
3L_13379241_SNP CG14110 DOWNSTREAM 216 7.40e-05
2L_4353069_SNP CG15429 SYNONYMOUS_CODING 0 7.44e-05
2R_20276477_SNP mAChR-A INTRON 0 7.47e-05
2L_14858849_SNP 7.48e-05
X_3945994_SNP 7.48e-05
X_4883035_SNP CR44833 INTRON 0 7.48e-05
2R_10963284_SNP 7.49e-05
2L_5684156_SNP 7.51e-05
2L_1611892_SNP CG14352 INTRON 0 7.54e-05
2L_1611892_SNP RFeSP DOWNSTREAM 537 7.54e-05
3R_3350035_SNP alpha-Est6 DOWNSTREAM 254 7.54e-05
3R_3350035_SNP alpha-Est7 UPSTREAM 560 7.54e-05
X_13400492_SNP Neto INTRON 0 7.54e-05
2R_20275800_SNP mAChR-A INTRON 0 7.55e-05
3R_22094885_SNP CG6154 INTRON 0 7.57e-05
2R_9208823_SNP 7.61e-05
3L_14070418_SNP btl INTRON 0 7.63e-05
3R_12996262_SNP Mur89F INTRON 0 7.65e-05
3R_17309666_SNP CG7922 INTRON 0 7.70e-05
3R_9755213_SNP 7.77e-05
2L_14839600_SNP CR43805 DOWNSTREAM 834 7.85e-05
3L_13381805_SNP Poc1 INTRON 0 7.88e-05
3L_13381805_SNP CG10171 UPSTREAM 798 7.88e-05
X_14993353_SNP Rab3-GEF INTRON 0 7.90e-05
X_13403437_SNP Neto INTRON 0 8.03e-05
2R_2589702_SNP CG45092 INTRON 0 8.11e-05
2R_2589702_SNP CG3409 INTRON 0 8.11e-05
2L_14839629_INS CR43805 DOWNSTREAM 804 8.12e-05
3L_7002948_SNP Mp INTRON 0 8.12e-05
2R_20270526_SNP mAChR-A INTRON 0 8.25e-05
2L_5942852_SNP Sfp26Ad SYNONYMOUS_CODING 0 8.31e-05
2L_5942852_SNP CR45289 DOWNSTREAM 268 8.31e-05
X_9641740_SNP Sp1 INTRON 0 8.32e-05
2L_8590036_SNP Sema-1a INTRON 0 8.33e-05
2L_8590036_SNP CR43855 DOWNSTREAM 334 8.33e-05
3R_3453798_SNP CG34127 INTRON 0 8.35e-05
3R_3453798_SNP CR44332 UPSTREAM 786 8.35e-05
4_216261_SNP CR44441 EXON 0 8.38e-05
2L_3233946_SNP 8.43e-05
2L_8325829_SNP CG7781 UPSTREAM 420 8.44e-05
3R_17307710_SNP CG7922 UPSTREAM 337 8.47e-05
3L_6639868_SNP 8.62e-05
2R_19551586_SNP Pde8 INTRON 0 8.63e-05
2L_3121567_SNP toc INTRON 0 8.68e-05
2L_5964588_SNP psd INTRON 0 8.69e-05
2L_5964588_SNP CG13992 DOWNSTREAM 803 8.69e-05
2L_6133846_SNP CR45719 UPSTREAM 172 8.74e-05
2L_9810997_SNP nAChRalpha6 INTRON 0 8.74e-05
2L_9811000_SNP nAChRalpha6 INTRON 0 8.74e-05
3L_13383636_SNP Poc1 UPSTREAM 530 8.77e-05
X_7585641_SNP CHES-1-like INTRON 0 8.81e-05
3R_17961180_SNP SKIP INTRON 0 8.88e-05
X_4533152_SNP pon DOWNSTREAM 7 8.92e-05
X_4533152_SNP CG3081 DOWNSTREAM 140 8.92e-05
2R_16711423_SNP insc SYNONYMOUS_CODING 0 8.93e-05
2L_9962445_SNP CG5850 INTRON 0 9.04e-05
2L_9962445_SNP CR43683 DOWNSTREAM 341 9.04e-05
X_14993974_SNP Rab3-GEF SYNONYMOUS_CODING 0 9.06e-05
3L_2293647_SNP MsR2 INTRON 0 9.08e-05
3R_5916394_SNP CR45054 DOWNSTREAM 147 9.08e-05
3R_5916394_SNP mir-317 UPSTREAM 454 9.08e-05
3R_7317976_SNP 9.08e-05
3R_17313134_SNP CG7922 DOWNSTREAM 127 9.11e-05
3R_5851098_SNP Mical INTRON 0 9.16e-05
3R_5851098_SNP CG31407 UPSTREAM 226 9.16e-05
2R_12835148_SNP Vha16-4 DOWNSTREAM 15 9.17e-05
2R_12835148_SNP CG34190 UPSTREAM 89 9.17e-05
3R_5285535_SNP GstZ2 INTRON 0 9.18e-05
3R_9755225_SNP 9.19e-05
X_7585423_SNP CHES-1-like INTRON 0 9.23e-05
3R_13434002_SNP sll SYNONYMOUS_CODING 0 9.28e-05
3R_13434033_SNP sll UTR_3_PRIME 0 9.28e-05
2R_20257613_SNP bs INTRON 0 9.30e-05
2R_20257613_SNP CR44811 UPSTREAM 401 9.30e-05
2L_17966311_SNP CG5674 INTRON 0 9.31e-05
2L_17966311_SNP btv NON_SYNONYMOUS_CODING 0 9.31e-05
3R_25873501_SNP CG7943 SYNONYMOUS_CODING 0 9.31e-05
3R_25873501_SNP CG15528 DOWNSTREAM 856 9.31e-05
2L_7751378_SNP CG7203 DOWNSTREAM 792 9.33e-05
3R_20707017_SNP CG11089 UTR_3_PRIME 0 9.35e-05
3R_20707017_SNP CG31121 DOWNSTREAM 171 9.35e-05
3R_7994186_SNP 9.36e-05
4_217807_DEL CG31998 DOWNSTREAM 510 9.40e-05
X_4985793_MNP rg INTRON 0 9.40e-05
X_4985793_MNP CG15465 INTRON 0 9.40e-05
2L_3427281_SNP pgant2 UPSTREAM 562 9.43e-05
3L_12404239_SNP CG32103 INTRON 0 9.45e-05
2R_3525595_SNP CG43340 INTRON 0 9.47e-05
3R_5721722_SNP Glut4EF INTRON 0 9.56e-05
2R_11006133_SNP chn INTRON 0 9.60e-05
2L_16629322_SNP CG42389 INTRON 0 9.61e-05
2L_16629322_SNP CR44151 UPSTREAM 149 9.61e-05
X_7585873_SNP CHES-1-like INTRON 0 9.63e-05
2R_3772313_SNP Dgk INTRON 0 9.68e-05
2L_7008310_SNP uif INTRON 0 9.69e-05
2L_14847378_SNP CG15279 INTRON 0 9.70e-05
3R_12996121_SNP Mur89F INTRON 0 9.76e-05
2R_16875395_SNP CG3216 SYNONYMOUS_CODING 0 9.77e-05
2R_20280640_SNP slik DOWNSTREAM 561 9.79e-05
3R_9585922_SNP CG34383 INTRON 0 9.90e-05
3R_17313074_SNP CG7922 DOWNSTREAM 67 9.93e-05
2L_14849398_SNP CG15279 INTRON 0 9.95e-05
2L_2601212_SNP CR44789 EXON 0 9.95e-05

1.4.5.2 Feature count

feature n
INTRON 197
DOWNSTREAM 60
UPSTREAM 37
SYNONYMOUS_CODING 32
NON_SYNONYMOUS_CODING 13
UTR_3_PRIME 11
UTR_5_PRIME 8
EXON 2

1.4.5.3 Gene counts

gene n
prom 23
Mur89F 19
bs 11
CG7922 11
Rab3-GEF 9
Sp1 8
CG7203 6
CHES-1-like 6
BBS4 5
CG15465 5
CG45068 5
CG45069 5
mAChR-A 5
rg 5
CG12268 4
CG15279 4
CG6106 4
Cad89D 3
CG15876 3
CG34417 3
CG6154 3
Hmgcr 3
MsR2 3
nAChRalpha6 3
RhoGEF64C 3
140up 2
btsz 2
CG10171 2
CG12006 2
CG13992 2
CG14352 2
CG15661 2
CG18519 2
CG2316 2
CG32103 2
CG34127 2
CG42531 2
CG43829 2
CG5850 2
CR43683 2
CR43805 2
CR44441 2
CR44792 2
CR44811 2
Damm 2
Dgk 2
Dscam3 2
EcR 2
IntS6 2
Lgr1 2
Mp 2
Neto 2
Ntf-2 2
nuf 2
p 2
Pde8 2
Poc1 2
psd 2
RFeSP 2
Rx 2
slik 2
sll 2
twf 2
AdamTS-A 1
Ald 1
alpha-Est6 1
alpha-Est7 1
bel 1
btl 1
btv 1
capu 1
CG10804 1
CG10960 1
CG11073 1
CG11089 1
CG13123 1
CG1339 1
CG13739 1
CG13954 1
CG14010 1
CG14110 1
CG14285 1
CG14286 1
CG14323 1
CG14961 1
CG15394 1
CG15395 1
CG15429 1
CG15528 1
CG15742 1
CG17265 1
CG17364 1
CG2065 1
CG2070 1
CG2556 1
CG30089 1
CG30389 1
CG30495 1
CG3081 1
CG31121 1
CG31407 1
CG31998 1
CG32137 1
CG32141 1
CG3216 1
CG32758 1
CG33275 1
CG33298 1
CG3409 1
CG34190 1
CG34295 1
CG34383 1
CG42383 1
CG42389 1
CG43340 1
CG44434 1
CG44435 1
CG45086 1
CG45092 1
CG45263 1
CG5359 1
CG5361 1
CG5674 1
CG7587 1
CG7606 1
CG7781 1
CG7943 1
CG7997 1
CG8177 1
CG9850 1
chn 1
CR32773 1
CR43669 1
CR43804 1
CR43855 1
CR44151 1
CR44332 1
CR44499 1
CR44534 1
CR44789 1
CR44833 1
CR44999 1
CR45054 1
CR45289 1
CR45380 1
CR45719 1
DAT 1
Eip75B 1
erm 1
esn 1
Galphaq 1
Glut4EF 1
grp 1
GstZ2 1
ham 1
insc 1
intr 1
MAPk-Ak2 1
mew 1
Mical 1
mir-317 1
msl-2 1
nAChRalpha5 1
NetA 1
NPF 1
Obp85a 1
osa 1
Pdsw 1
pgant2 1
pon 1
rad 1
rau 1
sbb 1
Sema-1a 1
Sfp26Ad 1
Sgs5 1
SKIP 1
sowah 1
Spn85F 1
sr 1
Tm1 1
toc 1
trio 1
tRNA:CR33534 1
Tsp47F 1
uif 1
Vha16-4 1
Vha44 1

1.5 Transcription Factors

1.5.1 CTmax

gene AvgMixedPval log2FoldChange.hot padj.hot
CG42741 3.06e-05 -2.62249777490736 0.000429462857877258
disco-r 1.70e-05 -1.07988555766566 0.000235480855977389
HmgD 8.63e-05 0.634526645170337 6.18703142355048e-08
HmgZ 7.74e-05 -0.686246964635641 0.000128805691870804
lola 9.00e-07 0.757570080626824 8.35992408829655e-12
Oaz 8.00e-07 -4.19435878302603 5.32430708209454e-07
Sp1 7.15e-05 -1.3007078900089 1.59832228718337e-05
svp 5.22e-05 -1.21333623987311 1.22762002553897e-07
twi 3.06e-05 -3.37514037814302 5.99873471577912e-08

1.5.2 CTmin

gene AvgMixedPval log2FoldChange.cold padj.cold
bs 1.00e-06 0.144584448310067 0.379938770129581
CHES-1-like 6.66e-05 0.341685001413222 0.0262236713676221
dar1 2.88e-05 -0.936811436367068 0.01022745364539
EcR 3.60e-05 0.232202783185468 0.0834130510236942
Eip75B 8.11e-05 0.370968044949429 0.0318988587096771
erm 2.87e-05 -2.86021424690657 1.84585446407225e-07
fru 8.46e-05 -0.464342415901663 0.031053651462023
Glut4EF 6.72e-05 0.258968227389969 0.106908652606818
ham 1.49e-05 -1.19027602903505 6.23872191303206e-05
Rx 8.57e-05 -3.58531728751657 1.86000170800676e-05
Sp1 2.43e-05 -0.666601851057948 0.0307516222909839
sr 4.73e-05 -0.654985784665561 0.0181251708752266

1.5.3 Venn diagram

2 Expression

2.1 MA plots

All MA plots now have an FDR of 0.01 and no fold-change cutoff.

2.1.1 No gene labels

Cold v Ctrl MA plot

Hot v Ctrl MA plot

2.1.2 GWAS points

Cold v Ctrl MA plot

Hot v Ctrl MA plot

2.1.3 GWAS colored labels

Cold v Ctrl MA plot

Hot v Ctrl MA plot

2.2 Venn Diagrams

2.2.1 Up-regulated genes

2.2.2 Down-regulated genes

2.3 Top 50 DEGs

Download full DESeq2 gene expression results

2.3.1 Heat-shock

gene hot_fc log2FoldChange.hot padj.hot
CG3339 down -5.155 1.097e-27
l(2)08717 down -2.3 4.051e-25
pip down -3.434 5.188e-24
stan down -2.592 2.063e-23
Dhc36C down -2.724 1.51e-22
ft down -3.361 4.602e-22
CG17075 down -2.455 5.379e-22
CG1801 down -3.692 2.458e-21
CG9492 down -4.122 2.881e-20
Dhc93AB down -3.104 1.029e-19
Dscam1 down -1.795 1.792e-19
CG42534 down -4.148 4.16e-19
CG6125 down -2.153 7.197e-19
CG1688 down -3.061 8.789e-19
btv down -4.624 1.002e-18
Sb down -4.59 1.126e-18
CG43980 down -4.82 1.34e-18
Muc14A down -2.612 1.372e-18
hiw down -1.521 1.414e-18
CG3348 down -3.219 1.822e-18
Nos down -3.834 2.877e-18
CG30263 down -3.978 4.212e-18
jv down -2.334 4.212e-18
conv down -4.136 4.94e-18
NT1 down -6.652 4.94e-18
Dop1R1 down -2.643 6.474e-18
Shawl down -3.459 8.688e-18
CG8745 down -2.145 1.314e-17
CG14304 down -4.486 1.542e-17
CG31465 down -6.373 2.078e-17
Ugt86Di down -5.074 4.038e-17
CR44327 down -2.536 4.654e-17
salr down -3.028 4.671e-17
nompC down -3.89 6.068e-17
SIFaR down -4.022 6.357e-17
Nlg4 down -2.488 8.891e-17
CG15894 down -2.427 1.946e-16
Cda5 down -1.12 2.097e-16
CG4744 down -6.327 2.705e-16
eag down -1.729 2.931e-16
CG30272 down -3.39 3.009e-16
Ac78C down -2.352 3.672e-16
CG45105 down -3.336 4.007e-16
Rab26 down -2.214 4.049e-16
CG12950 down -2.918 4.628e-16
CG32791 down -1.702 5.419e-16
TkR99D down -3.825 8.6e-16
Ddr down -3.329 9.219e-16
GABA-B-R1 down -2.256 1.09e-15
Sytbeta down -3.292 1.449e-15
Hsp68 up 6.888 0
DnaJ-1 up 3.727 2.219e-143
Hsp70Bb up 7.003 2.219e-143
stv up 4.471 2.373e-104
Hsp26 up 4.279 5.676e-72
Hsp67Bc up 4.785 2.957e-71
Hsp27 up 3.532 4.06e-62
Hsp83 up 2.106 6.281e-58
Hsp23 up 6.872 8.789e-53
Nop17l up 1.614 7.563e-52
CG6770 up 1.78 5.402e-48
Hop up 1.305 1.268e-43
CG42240 up 1.131 1.65e-41
Hsc70Cb up 1.271 5.313e-38
Jafrac1 up 0.8308 7.251e-38
CG16721 up 1.484 1.699e-36
CG1416 up 1.24 1.833e-34
CG5290 up 1.882 8.359e-34
Droj2 up 1.165 9.102e-33
Hsc70-3 up 1.522 2.984e-32
Lsd-2 up 1.004 2.845e-30
alphagamma-element:CR32865 up 6.317 1.507e-29
sra up 1.258 9.836e-29
CG10600 up 1.189 1.267e-28
Mlf up 1.019 1.689e-28
Capr up 0.9256 6.875e-28
mim up 1.18 1.125e-26
Hsp70Bc up 5.778 5.299e-26
CG10077 up 1.398 5.714e-26
Pgi up 0.9688 3e-25
ref(2)P up 1.398 7.851e-24
CG7033 up 1.009 4.144e-23
e(y)3 up 0.9014 8.199e-23
Trxr-1 up 1.139 1.335e-22
Pa1 up 1.987 1.445e-22
CG1943 up 1.14 1.445e-22
PEK up 1.254 5.637e-22
GstD1 up 0.8593 7.088e-22
phol up 1.028 8.707e-22
CG3680 up 0.8435 4.633e-21
TfIIEalpha up 1.076 1.121e-20
da up 0.8578 2.725e-20
cact up 0.8173 3.294e-20
Ran up 0.7748 6.905e-20
CG1677 up 0.8251 9.427e-20
betaTub56D up 1.038 1.749e-19
Cctgamma up 0.8277 6.345e-19
BRWD3 up 0.8852 7.197e-19
l(1)G0469 up 1.272 7.197e-19
Pdk up 1.35 1.224e-18

2.3.2 Cold-shock

gene cold_fc log2FoldChange.cold padj.cold
stan down -2.535 2.296e-20
Dhc93AB down -3.204 2.253e-19
CG3339 down -4.294 5.99e-19
CG1801 down -3.666 5.99e-19
CG3280 down -3.068 5.99e-19
CG42534 down -4.469 7.335e-19
CG32791 down -1.855 1.687e-17
ft down -2.987 8.646e-17
pip down -2.89 1.435e-16
Dscam1 down -1.683 2.136e-16
CG43163 down -3.52 4.912e-16
CG9492 down -3.725 5.06e-16
rk down -3.238 8.245e-16
Dhc36C down -2.296 1.463e-15
CG8219 down -5.491 1.463e-15
SIFaR down -4.039 2.331e-15
Ac78C down -2.361 3.608e-15
Ddr down -3.388 6.724e-15
d down -3.775 1.027e-14
CR45604 down -3.018 1.027e-14
mtt down -3.664 1.135e-14
Dhc62B down -3.892 1.49e-14
iav down -4.075 1.696e-14
CR45272 down -4.647 2.839e-14
prom down -2.737 2.839e-14
CG18519 down -3.233 2.839e-14
CG43110 down -3.216 4.113e-14
Nep5 down -3.804 4.113e-14
conv down -3.69 6.626e-14
rdgC down -1.94 6.946e-14
Shawl down -3.097 7.672e-14
CG44153 down -3.691 8.047e-14
Hsp68 down -1.071 8.344e-14
GluRIB down -2.415 9.254e-14
CG45002 down -1.938 9.254e-14
Sb down -3.89 1.557e-13
Nlg4 down -2.28 1.557e-13
CG4744 down -5.989 1.789e-13
trh down -2.138 2.011e-13
btv down -3.901 2.345e-13
rdo down -3.167 2.827e-13
Dop1R1 down -2.284 4.304e-13
unc-13-4A down -2.109 4.464e-13
TrpA1 down -4.111 4.79e-13
CG42255 down -1.631 5.093e-13
CG31814 down -3.185 5.781e-13
rad down -1.922 6.059e-13
Muc68Ca down -3.064 6.059e-13
CG43795 down -2.427 6.591e-13
eag down -1.562 7.105e-13
Jafrac1 up 0.6228 1.102e-19
Lsd-2 up 0.8045 1.486e-18
endos up 0.7605 1.544e-17
D1 up 0.684 1.687e-17
Muc4B up 2.542 1.687e-17
Capr up 0.7236 2.497e-16
CG14478 up 0.8465 3.717e-15
CG1677 up 0.73 7.404e-15
Ran up 0.6814 7.51e-15
CG15771 up 0.6845 1.537e-14
bif up 0.7919 2.869e-14
GstD1 up 0.7024 3.842e-14
e(y)3 up 0.7182 4.174e-14
mts up 0.638 6.428e-14
phol up 0.8291 9.254e-14
east up 0.7952 1.511e-13
Act5C up 0.6184 2.345e-13
CG8223 up 0.9441 2.752e-13
cact up 0.6657 4.446e-13
Rip11 up 0.7142 5.651e-13
CG1440 up 0.6414 5.951e-13
ssx up 0.6681 7.105e-13
swa up 0.8273 1.017e-12
tral up 0.8757 1.203e-12
CG1943 up 0.8542 1.883e-12
Pen up 0.898 2.887e-12
cib up 0.8765 3.891e-12
nocte up 0.7272 5.576e-12
CG6597 up 0.6554 5.593e-12
CG8963 up 0.6505 5.707e-12
mim up 0.7948 6.11e-12
Hmt4-20 up 0.7751 6.589e-12
CG12262 up 0.8364 1.29e-11
26-29-p up 0.8999 1.457e-11
rngo up 0.6756 1.476e-11
Jupiter up 0.6516 1.526e-11
CG4511 up 0.7374 1.68e-11
da up 0.6498 1.814e-11
pr-set7 up 0.8255 2.345e-11
Cap up 0.775 2.683e-11
CG10492 up 0.844 2.975e-11
Gapdh2 up 0.7177 3.343e-11
Rpt1 up 0.5432 3.942e-11
Df31 up 0.7823 4.048e-11
CG8108 up 0.6396 4.688e-11
betaTub56D up 0.7807 5.6e-11
Upf1 up 0.6236 5.655e-11
CG9705 up 0.7375 8.723e-11
Abi up 0.6488 8.733e-11
Amun up 0.7009 9.284e-11

2.4 Transription factors

2.4.1 Summary

deg TFs Up-regulated Down-regulated
Cold 321 109 212
Hot 386 142 244

2.4.1.1 Heat-shock

gene log2FoldChange padj
Plzf 1.467 6.28e-05
CG12071 1.435 6.862e-07
bcd 1.247 1.122e-10
hb 1.191 1.485e-08
insv 1.053 2.68e-09
phol 1.028 8.707e-22
jumu 1.003 5.147e-10
mod(mdg4) 0.9869 8.727e-16
tef 0.9769 1.153e-06
ovo 0.9665 9.264e-15
CG31224 0.9654 1.141e-15
retn 0.964 5.074e-09
woc 0.9423 1.623e-15
E2f2 0.9336 6.871e-06
Clamp 0.9166 6.447e-08
cad 0.9145 7.417e-11
CG8944 0.9068 9.797e-09
Hsf 0.9051 4.555e-10
CG8924 0.9044 1.468e-05
CG10321 0.9011 1.159e-14
CG17361 0.8891 1.185e-05
hang 0.8853 1.298e-13
pad 0.882 2.002e-07
wdn 0.8669 4.07e-08
GATAd 0.8652 1.936e-07
da 0.8578 2.725e-20
Aef1 0.8546 3.763e-12
Nf-YA 0.8519 3.214e-07
CG12104 0.8468 1.416e-05
CG4282 0.8431 2.328e-05
CG4936 0.8373 1.991e-05
CG31365 0.835 3.523e-05
pita 0.8347 1.573e-08
MESR4 0.8325 1.323e-14
E(bx) 0.8302 8.809e-10
chn 0.83 6.909e-09
pzg 0.8293 9.677e-12
Nf-YC 0.8285 6.157e-09
CG12391 0.8272 4.309e-08
CG8478 0.8213 0.002643
zf30C 0.8111 4.773e-08
BtbVII 0.8025 6.538e-11
D19A 0.7993 3.586e-07
NC2alpha 0.7946 0.003736
Cp190 0.7882 1.76e-11
apt 0.7864 2.138e-09
Stat92E 0.7815 2.575e-08
Br140 0.7793 4.458e-08
CG12659 0.7766 0.003406
usp 0.7706 7.054e-07
CG14965 0.7691 0.00204
polybromo 0.7686 4.48e-07
mld 0.7677 6.187e-08
CG12219 0.7615 0.001582
lola 0.7576 8.36e-12
Adf1 0.7349 6.965e-05
CG12299 0.73 0.0003555
psq 0.7276 4.136e-11
CG3847 0.7235 3.74e-10
Xbp1 0.7164 1.148e-05
tgo 0.7161 1.33e-07
CG10959 0.7029 0.007737
Cf2 0.7015 6.887e-09
exd 0.7009 1.544e-06
sima 0.7001 1.77e-08
cic 0.6936 5.673e-11
CTCF 0.6927 2.307e-05
CG30020 0.6926 0.0003136
z 0.6925 6.072e-08
cyc 0.6819 0.0001915
CG2199 0.6786 8.027e-08
D1 0.6767 4.94e-18
dl 0.6718 3.711e-08
su(Hw) 0.6701 0.000255
ken 0.6681 1.551e-05
Ssrp 0.6645 4.002e-07
CG9932 0.6632 0.001238
jing 0.6606 2.288e-09
Mrtf 0.6591 6.975e-13
MTA1-like 0.6552 4.198e-08
CG32767 0.6519 6.401e-08
Dp 0.6477 1.874e-08
Spps 0.6446 6.639e-07
az2 0.6361 0.006841
HmgD 0.6345 6.187e-08
CG12942 0.6314 6.631e-06
ssp 0.6307 6.112e-05
lilli 0.6262 2.893e-06
CG12236 0.6203 3.705e-06
Med 0.6202 6.823e-05
dbr 0.6176 0.001656
CG15435 0.6162 0.003805
Mad 0.6156 9.6e-07
cg 0.615 7.621e-11
pho 0.6132 0.002743
CG7987 0.6018 0.0001528
MBD-R2 0.6002 6.532e-06
Myb 0.5992 0.000199
Deaf1 0.5989 8.406e-10
Usf 0.5938 0.0005912
CG4360 0.5871 3.73e-07
cnc 0.5858 1.364e-06
Mitf 0.585 0.002795
Eip75B 0.5849 0.0004795
CG11247 0.5845 0.0002502
Meics 0.5843 0.001253
aop 0.5841 2.166e-05
CG10979 0.5803 0.0004165
ftz-f1 0.578 4.616e-07
CG2202 0.5738 0.006926
Hr96 0.5725 9.933e-05
CG10631 0.571 0.000357
Dref 0.5435 6.007e-05
CG15514 0.5358 0.004192
CG10462 0.535 0.001385
CG3065 0.5317 0.0001808
fs(1)h 0.5311 4.986e-05
CG9609 0.5273 0.001084
CG2116 0.5123 0.007626
sqz 0.4958 0.009534
CG10543 0.4949 2.542e-06
CG17829 0.4934 0.001356
Su(H) 0.4919 0.001289
CG32772 0.4842 0.0001428
Glut4EF 0.4774 0.002004
CG12054 0.4676 0.000726
stc 0.4459 0.001811
Mnt 0.44 0.001815
tai 0.4387 0.002338
CG6791 0.434 0.004502
row 0.4216 0.005631
bun 0.4166 0.000527
Smox 0.4083 0.003182
TFAM 0.399 0.002788
CG17385 0.3948 0.001653
CG11970 0.3909 0.007217
ttk 0.3764 0.0005769
crp 0.373 0.0005034
M1BP 0.3715 0.004144
crol 0.3647 0.005616
EcR 0.3606 0.005235
NFAT 0.3528 0.0006447
Ubx -0.5263 0.007598
zfh2 -0.5631 7.69e-05
CG31612 -0.6856 0.00354
HmgZ -0.6862 0.0001288
vnd -0.7212 0.0067
abd-A -0.7478 0.002395
vvl -0.7504 0.007795
bowl -0.7507 0.003517
fru -0.7624 0.0002635
chinmo -0.7729 9.461e-05
tsh -0.7791 0.0003196
dve -0.7935 9.027e-05
Sox102F -0.817 0.001398
Hr38 -0.8253 0.006285
Kah -0.8757 0.003915
mirr -0.8773 0.0001026
sens-2 -0.8845 0.0009101
sr -0.8971 0.0008828
fkh -0.8998 4.686e-06
ap -0.9056 0.0006074
fuss -0.9281 0.004046
knrl -0.9463 0.00428
pdm3 -0.9607 5.231e-06
CG12605 -0.9641 0.0001113
Six4 -0.9651 0.0001184
CG4496 -0.9686 0.0005481
CG32121 -0.976 0.007424
CG16779 -1.017 1.585e-06
onecut -1.026 0.0001666
Ptx1 -1.03 2.222e-05
salm -1.059 0.0004024
disco-r -1.08 0.0002355
SoxN -1.097 0.0002635
tio -1.136 0.000466
Dll -1.2 6.167e-05
grh -1.205 2.98e-13
CG11617 -1.207 0.001218
svp -1.213 1.228e-07
CG6808 -1.247 0.001066
sug -1.26 4.539e-05
bi -1.281 1.48e-05
Sp1 -1.301 1.598e-05
Dr -1.311 0.0001905
Ets98B -1.339 7.783e-08
disco -1.347 2.725e-06
Lim1 -1.349 0.0003582
Antp -1.402 1.445e-10
ab -1.417 9.789e-11
CG14655 -1.46 0.004175
CG43347 -1.464 5.292e-09
CG16863 -1.507 0.0002512
oc -1.511 2.487e-05
dar1 -1.515 2.262e-05
so -1.521 1.549e-07
CG13775 -1.526 0.0007966
CG17803 -1.565 0.008424
mid -1.585 5.061e-10
CG6813 -1.585 0.0001325
toy -1.611 5.318e-07
Eip78C -1.651 2.524e-08
lab -1.675 0.001636
esg -1.715 0.002406
GATAe -1.716 1.168e-09
nub -1.736 5.008e-10
org-1 -1.755 6.68e-07
CG10348 -1.766 3.875e-05
CG6765 -1.776 0.0001325
caup -1.778 7.008e-10
CG17801 -1.804 0.004766
Sox100B -1.863 0.001091
trh -1.871 1.677e-11
odd -1.895 1.168e-09
CG2120 -1.941 1.046e-05
ham -1.956 2.107e-11
Abd-B -1.984 8.306e-10
CG14050 -1.991 0.002962
kni -2.038 6.855e-10
dac -2.043 5.901e-11
opa -2.051 0.000724
FoxP -2.056 7.736e-07
H15 -2.063 5.301e-11
toe -2.069 1.498e-06
tup -2.108 6.612e-09
CG14860 -2.109 0.0006494
gl -2.127 1.041e-06
rn -2.14 2.085e-08
Ets21C -2.199 1.957e-11
Doc1 -2.204 0.0002914
Scr -2.21 1.028e-06
Sox21b -2.237 3.348e-06
B-H1 -2.259 0.001562
sv -2.277 1.693e-13
Awh -2.278 0.001685
Lim3 -2.279 8e-07
B-H2 -2.358 9.88e-08
slp1 -2.364 0.003897
dpn -2.379 0.001909
acj6 -2.401 9.592e-08
topi -2.432 0.000195
CG4374 -2.437 5.686e-08
Sox15 -2.444 3.242e-06
eve -2.451 0.003517
slp2 -2.515 1.762e-06
nau -2.52 1.174e-07
E(spl)m7-HLH -2.555 0.008501
ss -2.56 1.883e-09
lov -2.584 0.0003596
byn -2.586 3.462e-06
CG18265 -2.592 5.254e-13
grn -2.608 4.334e-08
CG7368 -2.613 1.772e-06
unc-4 -2.618 2.561e-07
CG42741 -2.622 0.0004295
D -2.63 2.369e-07
btd -2.632 1.418e-05
cas -2.651 2.93e-09
rib -2.71 0.002472
repo -2.761 4.53e-09
pnr -2.803 5.955e-10
kn -2.809 1.305e-10
ey -2.835 1.119e-08
Poxm -2.853 2.334e-08
ara -2.856 1.174e-07
lz -2.862 1.544e-10
pdm2 -2.876 1.03e-10
fd96Cb -2.891 0.007248
Sox21a -2.897 1.978e-06
Kr -2.9 0.0001165
sob -2.919 8.528e-07
dan -2.926 0.001798
CG32532 -2.93 3.805e-07
net -2.933 1.524e-10
E5 -2.964 1.119e-07
CG34031 -2.99 0.006284
zen -2.991 5.262e-05
Crg-1 -3.003 4.499e-05
salr -3.028 4.671e-17
Dfd -3.039 6.296e-09
TfAP-2 -3.069 2.392e-06
run -3.076 3.035e-05
Ets65A -3.076 1.027e-07
Pph13 -3.077 7.009e-06
otp -3.114 1.355e-10
slou -3.15 0.003981
bab1 -3.158 1.797e-14
dmrt99B -3.195 5.766e-05
CG4328 -3.226 0.003283
lbl -3.235 1.488e-07
Fer1 -3.24 5.75e-05
Optix -3.261 2.207e-06
CG13894 -3.265 2.542e-06
croc -3.314 1.067e-06
CG32006 -3.315 5.884e-07
twi -3.375 5.999e-08
en -3.42 1.078e-06
eyg -3.432 7.525e-10
bap -3.455 1.907e-06
H2.0 -3.482 5.107e-06
danr -3.506 4.084e-09
RunxA -3.511 9.743e-10
Dbx -3.536 7.49e-05
sens -3.557 0.001085
inv -3.638 4.794e-06
tap -3.645 3.36e-06
hbn -3.659 2.205e-05
eg -3.66 1.169e-05
Doc3 -3.668 0.0006998
nerfin-1 -3.724 9.763e-05
bin -3.733 4.945e-09
Ets96B -3.744 4.109e-11
CG13287 -3.776 4.42e-05
Oli -3.779 1.873e-06
E(spl)m8-HLH -3.836 0.003942
Vsx2 -3.892 7.133e-08
fd102C -3.942 9.7e-07
HGTX -3.95 3.09e-10
unpg -3.977 0.0001238
E(spl)mdelta-HLH -3.98 9.769e-06
pb -3.985 1.906e-09
vis -4.029 0.001343
dmrt93B -4.042 3.616e-05
CG11294 -4.067 2.281e-06
C15 -4.09 6.544e-05
HHEX -4.129 4.776e-05
lmd -4.166 5.506e-09
gcm -4.189 0.008687
Oaz -4.194 5.324e-07
CG7786 -4.24 0.0003943
Vsx1 -4.289 2.671e-08
erm -4.316 2.629e-14
lms -4.385 5.593e-08
al -4.443 1.78e-08
fd59A -4.45 3.584e-05
dmrt11E -4.497 7.111e-06
Gsc -4.517 0.001468
PHDP -4.571 0.0009058
Hmx -4.581 1.432e-12
Fer2 -4.599 0.0001236
ro -4.643 0.004167
Hr83 -4.697 0.0008417
RunxB -4.697 4.654e-06
dimm -4.761 1.172e-05
gsb -4.773 0.0001232
tin -4.781 4.194e-06
ase -4.794 8.666e-09
sc -4.838 4.071e-06
lbe -4.843 7.033e-08
Hey -4.871 3.807e-07
CG18599 -5.002 3.459e-05
gsb-n -5.033 3.182e-08
Poxn -5.075 4.61e-13
CG15696 -5.13 0.004168
HLH4C -5.194 8.768e-05
Rx -5.404 4.611e-10
dsf -5.454 2.229e-06
bsh -5.553 8.916e-07
CG15269 -5.57 0.0006733
Hr51 -5.668 6.751e-10
hkb -5.798 2.572e-09
HLH3B -5.823 6.649e-07
OdsH -5.847 8.882e-07
gcm2 -6.001 0.0002684
CG4318 -6.019 4.296e-06
ftz -6.318 5.815e-06
fd19B -6.441 4.602e-05
CG34367 -6.736 1.159e-07
fd3F -6.818 1.731e-07
amos -6.999 7.164e-05
Neu2 -7.156 2.167e-07
fd96Ca -7.373 7.423e-09
tll -7.403 2.798e-08
prd -7.669 3.684e-12
term -7.726 1.861e-05
zen2 -7.804 5.121e-05
Fer3 -7.884 0.0001366
ac -8.116 1.286e-05
CG11085 -8.133 1.688e-07
CG7963 -8.415 7.364e-08
wor -8.461 1.212e-08
CG15710 -8.651 1.784e-06
CG7691 -8.804 1.182e-07
sisA -8.815 7.669e-06
nerfin-2 -8.876 1.435e-10
CG13617 -10.11 3.71e-09

2.4.1.2 Cold-shock

gene log2FoldChange padj
srp 1.028 3.134e-10
insv 0.9137 5.317e-07
hb 0.8772 5.015e-05
CG17361 0.8353 6.672e-05
phol 0.8291 9.254e-14
CG9609 0.7717 3.331e-06
tgo 0.7714 3.223e-08
retn 0.7688 5.833e-06
cad 0.7568 1.63e-07
Cp190 0.7547 3.322e-10
vri 0.7535 0.0006789
HmgD 0.7502 3.986e-10
bcd 0.7454 0.000187
Ssrp 0.7398 3.978e-08
woc 0.7379 1.521e-09
hang 0.7378 2.044e-09
apt 0.736 4.878e-08
Clamp 0.7256 3.283e-05
pita 0.7201 2.299e-06
E(bx) 0.7074 3.763e-07
CG4936 0.7031 0.0005188
MESR4 0.6917 5.21e-10
mod(mdg4) 0.6904 5.491e-08
jumu 0.6901 3.372e-05
chn 0.6874 3.126e-06
D1 0.684 1.687e-17
GATAd 0.6725 8.685e-05
CG12391 0.6701 1.688e-05
CG8924 0.67 0.001808
CG8944 0.6695 3.943e-05
pzg 0.6693 9.483e-08
usp 0.6691 2.954e-05
Nf-YC 0.6654 5.948e-06
CG12219 0.6645 0.007459
CG3065 0.6616 6.24e-06
CG31224 0.6606 1.2e-07
su(Hw) 0.6579 0.0004856
pad 0.6565 0.0001757
Spps 0.6545 9.739e-07
da 0.6498 1.814e-11
CTCF 0.6482 0.0001192
CG12942 0.6254 1.535e-05
sima 0.6211 1.161e-06
Sox14 0.6184 0.00181
Aef1 0.6164 1.181e-06
bun 0.6157 6.258e-07
Mnt 0.6061 2.945e-05
Rel 0.6056 0.004253
CG31365 0.6046 0.003656
BtbVII 0.6013 2.061e-06
cg 0.5983 6.623e-10
tef 0.5982 0.003859
mld 0.5952 4.548e-05
CG2202 0.5937 0.006495
cic 0.5926 5.2e-08
CG12299 0.5912 0.004952
CG2199 0.5909 5.833e-06
MTA1-like 0.5907 1.587e-06
ken 0.5903 0.0002091
CG32767 0.584 2.498e-06
CG10979 0.5828 0.0005742
aop 0.5787 4.353e-05
CG12236 0.5772 2.955e-05
ovo 0.576 8.284e-06
lola 0.5741 4.847e-07
pho 0.5706 0.006642
psq 0.5692 5.29e-07
z 0.5688 1.719e-05
CG4282 0.5643 0.006023
Nf-YA 0.5605 0.001167
CG4360 0.5542 3.281e-06
Hsf 0.5455 0.0002677
Mad 0.5453 2.598e-05
Mrtf 0.5345 1.76e-08
wdn 0.5272 0.001208
D19A 0.5225 0.00128
Dp 0.5208 1.157e-05
CG10321 0.5149 2.396e-05
cyc 0.5133 0.00651
zf30C 0.5117 0.0008523
CG12054 0.5106 0.0003316
Su(H) 0.5099 0.001193
ssp 0.5067 0.001831
lilli 0.5002 0.0002809
CG3847 0.4992 3.059e-05
stc 0.4891 0.0008705
CG10543 0.4877 6.778e-06
ftz-f1 0.4876 3.612e-05
crol 0.487 0.0003144
fs(1)h 0.4857 0.0003085
Stat92E 0.4841 0.0007987
polybromo 0.4812 0.002155
Cf2 0.4581 0.0002381
dl 0.4567 0.0002808
Deaf1 0.4506 8.285e-06
exd 0.4482 0.002864
Br140 0.4461 0.002367
Myb 0.441 0.007866
jing 0.4395 0.0001163
Dref 0.437 0.001766
CG32772 0.4274 0.001128
TFAM 0.4208 0.002237
Hr96 0.4091 0.007038
MBD-R2 0.4061 0.00314
Dsp1 0.3712 0.005967
M1BP 0.3543 0.008075
CG17385 0.3513 0.006499
crp 0.3446 0.001792
ttk 0.3126 0.005435
Eip74EF -0.3976 0.006202
zfh2 -0.444 0.002474
Rfx -0.5994 0.006591
CG12605 -0.6778 0.008081
CG31612 -0.6899 0.004598
tsh -0.7613 0.0006817
Dll -0.8284 0.006951
chinmo -0.8518 3.153e-05
CG4496 -0.8523 0.003231
H15 -0.8617 0.00583
grh -0.8753 2.758e-07
pdm3 -0.8772 5.914e-05
CG12071 -0.8989 0.003288
Hr38 -0.9228 0.003039
kni -0.9262 0.005147
fuss -0.9475 0.004403
CG16779 -0.9538 1.25e-05
Antp -1.021 5.415e-06
org-1 -1.062 0.0031
caup -1.145 9.593e-05
ab -1.173 1.985e-07
ham -1.19 6.239e-05
Eip78C -1.205 7.055e-05
disco-r -1.219 5.982e-05
toy -1.222 0.0002064
CG43347 -1.241 1.515e-06
bi -1.256 3.931e-05
oc -1.3 0.0004242
Lim1 -1.325 0.000685
so -1.34 7.877e-06
onecut -1.354 1.767e-06
net -1.376 0.002133
CG6808 -1.437 0.0003117
tio -1.455 1.794e-05
pdm2 -1.485 0.0008209
CG16863 -1.485 0.0005193
tx -1.529 0.001829
Ets21C -1.534 4.362e-06
E(spl)m3-HLH -1.543 1.764e-05
CG6765 -1.547 0.001204
Abd-B -1.574 1.998e-06
dac -1.611 4.713e-07
unc-4 -1.644 0.001343
tup -1.652 9.081e-06
Sox21b -1.679 0.0006362
CG17803 -1.686 0.006033
CG6813 -1.695 0.0001019
rn -1.716 1.149e-05
Lim3 -1.721 0.000264
ems -1.728 0.002555
CG17801 -1.736 0.008434
toe -1.788 5.502e-05
slp2 -1.802 0.000729
gl -1.803 5.61e-05
opa -1.821 0.003525
btd -1.822 0.003055
CG13775 -1.825 0.0001454
CG14860 -1.896 0.002909
kn -1.918 1.434e-05
byn -1.982 0.0004888
D -1.982 0.0001305
sv -2.004 2.945e-10
gt -2.031 0.0001503
acj6 -2.061 8.422e-06
CG7368 -2.07 0.0002081
salr -2.078 1.279e-08
Dfd -2.088 6.894e-05
ss -2.137 9.78e-07
trh -2.138 2.011e-13
CG4374 -2.145 3.363e-06
Scr -2.155 4.091e-06
nau -2.189 9.132e-06
CG18265 -2.196 2.474e-09
CG10348 -2.242 6.979e-07
zen -2.293 0.002232
Fer1 -2.298 0.004616
en -2.314 0.0009984
H2.0 -2.318 0.002352
pnr -2.34 4.41e-07
sob -2.347 0.000105
lov -2.373 0.001431
Sox15 -2.391 1.113e-05
Awh -2.403 0.001382
topi -2.438 0.0003181
ara -2.449 9.63e-06
B-H2 -2.47 9.041e-08
TfAP-2 -2.479 0.0001871
grn -2.48 4.624e-07
B-H1 -2.48 0.0008523
CG32532 -2.518 2.102e-05
rib -2.523 0.00603
Poxm -2.533 1.402e-06
dpn -2.534 0.001428
Pph13 -2.538 0.0002816
ey -2.576 4.543e-07
sc -2.578 0.008095
twi -2.583 3.854e-05
Doc1 -2.592 5.899e-05
E5 -2.601 5.811e-06
hbn -2.608 0.002512
CG32006 -2.679 7.239e-05
bap -2.693 0.0002431
bab1 -2.701 1.577e-10
eyg -2.714 1.538e-06
Vsx2 -2.718 0.0001488
Oli -2.738 0.0005134
fd102C -2.758 0.0005627
tap -2.831 0.0003334
FoxP -2.831 1.577e-10
CG42741 -2.832 0.000255
erm -2.86 1.846e-07
bin -2.892 6.683e-06
croc -2.937 2.801e-05
lbl -2.939 3.662e-06
unpg -2.987 0.004162
HLH54F -2.988 0.005604
CG13287 -3.054 0.001116
Optix -3.062 1.716e-05
cas -3.076 1.363e-10
danr -3.116 4.303e-07
lbe -3.123 0.0003163
lz -3.154 3.081e-11
RunxA -3.203 5.657e-08
run -3.211 3.167e-05
bsh -3.22 0.002765
slou -3.222 0.004281
otp -3.355 7.126e-11
CG11085 -3.355 0.002285
CG11294 -3.388 0.0001033
Ets96B -3.397 6.011e-09
CG4328 -3.398 0.002893
eg -3.402 7.955e-05
Oaz -3.417 5.723e-05
fd59A -3.46 0.001314
Ets65A -3.475 9.709e-09
CG13617 -3.504 0.003781
CG13894 -3.545 1.457e-06
Hmx -3.549 3.259e-08
Rx -3.585 1.86e-05
pb -3.619 1.042e-07
al -3.658 4.271e-06
C15 -3.81 0.0003086
dan -3.81 0.0001076
Doc3 -3.813 0.0007004
dimm -3.869 0.0004282
eve -3.871 5.203e-05
Dbx -3.902 4.473e-05
hkb -3.91 1.061e-05
Vsx1 -3.917 7.812e-07
CG34367 -3.945 0.000375
nerfin-1 -3.946 7.675e-05
E(spl)m7-HLH -3.962 0.0002569
HGTX -4.011 1.473e-09
CG7963 -4.012 0.0002494
lms -4.045 1.349e-06
prd -4.105 1.403e-07
sna -4.141 0.002998
fd19B -4.143 0.003655
dmrt99B -4.17 2.29e-06
Gsc -4.226 0.00374
RunxB -4.242 5.402e-05
sisA -4.243 0.009601
Poxn -4.249 1.46e-09
PHDP -4.262 0.002717
gsb -4.355 0.000652
CG9876 -4.356 0.006096
wor -4.367 1.755e-05
nerfin-2 -4.371 1.144e-07
ase -4.427 3.188e-07
term -4.46 0.004252
inv -4.466 1.006e-07
HHEX -4.475 4.21e-05
E(spl)mgamma-HLH -4.51 0.001086
Neu2 -4.528 8.867e-05
E(spl)m8-HLH -4.537 0.002061
CG18599 -4.631 0.0002061
Doc2 -4.659 0.0006841
HLH4C -4.662 0.0005663
gcm -4.739 0.00458
dsf -4.771 4.529e-05
CG33557 -4.872 0.006958
lmd -4.965 4.591e-10
CG7691 -4.973 0.000133
E(spl)m5-HLH -4.976 0.006159
Hr51 -4.98 8.417e-08
gsb-n -4.99 2.705e-07
CG4318 -5.132 8.379e-05
Kr -5.151 2.654e-09
gcm2 -5.176 0.001807
HLH3B -5.21 1.437e-05
Hey -5.231 1.378e-06
tll -5.26 7.865e-06
Hr83 -5.29 0.0007808
tin -5.36 3.286e-06
fd96Cb -5.511 5.402e-05
ftz -5.6 9.431e-05
Fer2 -5.706 2.841e-05
OdsH -5.938 1.055e-05
ro -6.017 0.001023
CG15710 -6.048 0.0003508
dmrt93B -6.117 2.365e-06
zen2 -6.297 0.001434
CG7786 -6.432 0.0001347
dmrt11E -6.528 1.46e-06
CG34031 -6.586 8.336e-05
E(spl)mdelta-HLH -6.624 1.951e-06
CG15696 -7.248 0.0005221
Fer3 -7.342 0.0005514
CG15336 -7.427 0.001094
cato -7.578 0.0006299
fd3F -7.829 2.746e-06
fd96Ca -8.983 2.222e-08

2.4.1.3 Venn Diagram

3 Integrate DEGs and GWAS

3.1 GWAS lfc expression density

3.2 Density plot overlay

3.3 KS test

K.S. pairwise comparisons of the distributions of top GWAS genes under shock
GWAS distributions Heat-shock Cold-shock
Other vs. CTmin 0.1562769 0.0624962
Other vs. CTmax 0.0063858 0.0102758
CTmin vs. CTmax 0.1697556 0.0511528

3.4 Differentially expressed GWAS hits

3.4.1 CTmin

gene log2FoldChange padj AvgMixedPval
CG42383 -5.5871122 0.0001487 0.00e+00
prom -2.7365741 0.0000000 0.00e+00
CR32773 -2.2607394 0.0000150 1.00e-07
Mur89F -4.4038772 0.0000130 7.00e-07
CG18519 -3.2325995 0.0000000 2.20e-06
msl-2 -0.9840645 0.0009362 3.20e-06
Lgr1 -1.7919492 0.0000041 3.60e-06
Sema-2b -1.1917267 0.0010433 4.20e-06
IntS6 0.5000169 0.0008455 7.50e-06
CG15395 -8.1334938 0.0000024 7.60e-06
BBS4 -4.1080977 0.0005220 7.80e-06
CG15279 -0.7577568 0.0018673 1.17e-05
CG2556 0.4831685 0.0053906 1.43e-05
Dgk -1.4800731 0.0000002 1.45e-05
CG5361 -2.6473548 0.0002408 1.48e-05
CR43804 -4.7562995 0.0035476 1.49e-05
ham -1.1902760 0.0000624 1.49e-05
CG30389 0.5221708 0.0000004 1.55e-05
Mp -0.5685921 0.0006351 1.80e-05
slik 0.5628954 0.0000099 1.81e-05
Rab3-GEF -1.3657175 0.0000023 1.83e-05
bxd -4.5883800 0.0005200 1.85e-05
CG45263 -0.9194662 0.0000343 2.83e-05
Obp85a -3.1872098 0.0063290 2.83e-05
erm -2.8602142 0.0000002 2.87e-05
Spn47C -1.4819018 0.0031402 2.89e-05
CR44535 -8.8456787 0.0000001 3.13e-05
osa 0.7026349 0.0000006 3.26e-05
SerT -2.7347181 0.0000522 3.51e-05
CG4629 -1.0729203 0.0002792 3.60e-05
sra 0.5030752 0.0000297 3.72e-05
mAChR-A -1.2968162 0.0000560 3.81e-05
Gpdh 0.4251861 0.0018291 3.86e-05
ago 0.5639989 0.0001462 3.98e-05
CG14010 -2.7582355 0.0000003 4.01e-05
CR43417 -1.5852196 0.0022590 4.44e-05
rad -1.9219170 0.0000000 4.64e-05
CR43805 -7.9666820 0.0000005 5.07e-05
CG13954 -2.7968328 0.0000001 5.08e-05
CG10960 0.4975810 0.0015989 5.37e-05
CG43759 0.4652958 0.0073086 5.38e-05
CG43373 -2.3960473 0.0000000 5.52e-05
CG17047 -4.8127676 0.0000520 5.62e-05
rau -0.6651590 0.0093952 5.64e-05
mam 0.6367928 0.0000786 6.31e-05
Fili -1.5553400 0.0000058 6.40e-05
Jhe -2.1029257 0.0005439 6.54e-05
CG34295 -5.7901280 0.0011628 6.75e-05
intr -7.2116144 0.0007224 6.75e-05
CG43795 -2.4273461 0.0000000 6.81e-05
CG6106 -2.6935022 0.0000000 6.92e-05
CG32758 0.2998430 0.0089244 7.32e-05
CG31296 -3.1148453 0.0000028 7.36e-05
CG9981 -3.9974563 0.0000000 7.45e-05
robo3 -2.1160741 0.0000110 7.48e-05
CG34356 -2.6005555 0.0000000 8.16e-05
iab-8 -3.1580074 0.0000076 8.42e-05
CG8177 0.4401442 0.0003033 8.56e-05
Rx -3.5853173 0.0000186 8.57e-05
Cad89D -3.9962867 0.0000001 8.63e-05
CG3349 -5.9748072 0.0000053 8.90e-05
CG34457 -4.7723454 0.0000204 9.18e-05
CG34458 -7.5567105 0.0002176 9.18e-05
CG13578 -3.3638739 0.0007830 9.20e-05
CG32103 0.3498158 0.0093199 9.20e-05
Dscam3 -2.6880732 0.0000000 9.38e-05
CG1339 -5.0469464 0.0000492 9.40e-05
CG30495 -2.0261503 0.0000256 9.40e-05
shg 0.5751270 0.0000577 9.41e-05
CG18516 -4.8711410 0.0000001 9.48e-05
CR44813 -7.0680958 0.0002387 9.51e-05
CG42342 -1.3129615 0.0000001 9.90e-05

3.4.2 CTmax

gene log2FoldChange padj AvgMixedPval
Oaz -4.1943588 0.0000005 8.00e-07
lola 0.7575701 0.0000000 9.00e-07
CG30263 -3.9780964 0.0000000 2.60e-06
CG42673 -0.5712892 0.0012136 6.00e-06
Grip -1.7521418 0.0000003 6.00e-06
CG34127 -1.8099202 0.0000001 7.60e-06
CG13085 -2.6496684 0.0000641 8.40e-06
CG16771 -0.8286223 0.0008717 8.40e-06
twin 0.8396765 0.0000000 1.00e-05
iab-8 -4.0350937 0.0000000 1.18e-05
beat-VII -1.8138004 0.0000000 1.20e-05
sbr 0.6921680 0.0000001 1.32e-05
CG13936 -1.8787231 0.0000000 1.42e-05
disco-r -1.0798856 0.0002355 1.70e-05
CG32082 -0.7413805 0.0002725 1.75e-05
olf413 -1.0896777 0.0000000 1.75e-05
dpr8 -1.1744650 0.0000001 1.81e-05
Rassf 0.5193134 0.0000133 2.59e-05
Claspin 0.7202446 0.0000118 3.04e-05
CG42741 -2.6224978 0.0004295 3.06e-05
twi -3.3751404 0.0000001 3.06e-05
fz 0.6915074 0.0027428 3.23e-05
Ten-m 0.5093614 0.0004640 3.43e-05
Prosap 0.6195067 0.0000004 3.56e-05
CG33772 -4.3592863 0.0023141 3.91e-05
CG14253 -1.4680668 0.0001054 3.97e-05
CG5639 -2.1478501 0.0000002 4.13e-05
raps 0.6904070 0.0000225 4.13e-05
CG33752 -7.9338938 0.0000048 4.71e-05
Src64B 0.9478665 0.0000000 4.74e-05
Cngl -1.1788951 0.0000070 4.89e-05
beat-Ia -2.8893751 0.0000001 5.05e-05
CG44037 -8.4335743 0.0000016 5.22e-05
svp -1.2133362 0.0000001 5.22e-05
Btk29A 0.5948055 0.0012953 5.42e-05
CG43124 -7.8587522 0.0001261 6.51e-05
CG42237 -2.9561407 0.0060515 6.67e-05
CG13614 -7.8257200 0.0001061 6.84e-05
CG17782 -7.8732367 0.0000002 6.84e-05
CG11221 -1.7001489 0.0000824 7.01e-05
Sp1 -1.3007079 0.0000160 7.15e-05
CG43867 0.3202420 0.0082584 7.22e-05
CG13889 -4.1520606 0.0000000 7.42e-05
Gr61a -3.7635511 0.0000001 7.42e-05
CngB -2.6556801 0.0000004 7.74e-05
HmgZ -0.6862470 0.0001288 7.74e-05
CG17267 -5.9466283 0.0000042 8.26e-05
CG42322 -1.7732701 0.0000001 8.26e-05
Tsp66E 0.6152493 0.0023424 8.27e-05
CG42313 -2.4899124 0.0000000 8.33e-05
Cdc6 0.9284323 0.0000002 8.54e-05
HmgD 0.6345266 0.0000001 8.63e-05
CG4911 0.6063036 0.0010705 8.76e-05
CG14521 -2.3584139 0.0000061 8.77e-05
Moe 0.2931005 0.0058126 8.79e-05
CG17177 -5.7059519 0.0000001 8.94e-05
ome -0.5577032 0.0027215 8.94e-05
CG45186 0.4077359 0.0000715 9.00e-05
CG3515 -5.0712816 0.0015379 9.43e-05

3.5 Non-differentially expressed GWAS hits

3.5.1 CTmin

gene log2FoldChange padj AvgMixedPval
bs 0.1445844 0.3799388 1.00e-06
CR44811 -1.4259829 0.0384253 1.00e-06
CG14285 -1.4995711 0.0856829 3.10e-06
CG14286 0.4031444 0.2128495 3.10e-06
Pdsw 0.2479016 0.2046792 3.20e-06
AdamTS-A -0.4413991 0.0408263 4.20e-06
140up -0.1732066 0.5805642 5.60e-06
twf 0.1162217 0.6628676 5.60e-06
CR44792 -3.4923464 0.1027393 6.60e-06
CG15876 -2.7195017 0.1168853 7.50e-06
RhoGEF64C -0.1053055 0.6751917 7.50e-06
capu -0.3582142 0.0736427 9.70e-06
nuf 0.2135095 0.0440994 1.30e-05
NetA -0.7035057 0.0574468 1.55e-05
NPF -0.8256724 0.0411958 1.58e-05
CG30460 -0.1057575 0.6777675 2.08e-05
CG42389 0.2120230 0.1411121 2.42e-05
CR44151 -6.2655235 0.0276919 2.42e-05
Sp1 -0.6666019 0.0307516 2.43e-05
CG15661 -0.7626331 0.0443315 2.55e-05
CR44499 -1.7614702 0.4922135 2.58e-05
CR45641 -3.0349476 0.0985275 2.58e-05
CG12268 -1.2185148 0.0123337 2.74e-05
dar1 -0.9368114 0.0102275 2.88e-05
GstZ2 -0.7453296 0.0127675 3.36e-05
CG18522 0.2363914 0.2752876 3.58e-05
EcR 0.2322028 0.0834131 3.60e-05
CG6126 -0.5072926 0.0251501 3.72e-05
CG11073 0.2688807 0.3930524 3.78e-05
CG12006 0.3149977 0.0932517 3.86e-05
CG1265 -0.4722831 0.2959960 3.98e-05
CR44789 -3.6164107 0.1135397 4.04e-05
CG5550 -0.2298054 0.7124191 4.44e-05
sr -0.6549858 0.0181252 4.73e-05
trio 0.2338524 0.1703609 4.76e-05
CG13992 0.3134457 0.3500047 4.87e-05
psd 0.4336645 0.4803480 4.87e-05
CG13739 -0.5898350 0.0863940 5.08e-05
CG2316 0.0953003 0.7126849 5.18e-05
Hmgcr -0.1685312 0.4770795 5.18e-05
Btk29A 0.4542883 0.0169365 5.27e-05
CG8086 -0.1003322 0.6755711 5.27e-05
CG17265 -0.3187043 0.2937452 5.49e-05
CG8006 -3.7761940 0.0156169 5.61e-05
CG8012 0.3226505 0.1517587 5.61e-05
CG2065 -0.0398193 0.9272138 5.71e-05
CG2070 -1.4308298 0.0170276 5.71e-05
ASPP 0.0744941 0.7528826 5.88e-05
CG9864 -0.3639270 0.3222716 6.51e-05
CHES-1-like 0.3416850 0.0262237 6.66e-05
Glut4EF 0.2589682 0.1069087 6.72e-05
axo -0.6006333 0.0109730 7.01e-05
Poc1 -0.1727329 0.6697588 7.10e-05
CG6424 0.3686539 0.0256026 7.51e-05
CG14352 -0.0429792 0.9334392 7.65e-05
Pkcdelta -0.3750263 0.1343434 7.65e-05
RFeSP 0.1203562 0.4344966 7.65e-05
CG31266 -0.5154979 0.1665989 7.84e-05
CG31267 -0.7599912 0.2402725 7.84e-05
CR45289 -5.4396968 0.0207414 7.99e-05
Sfp26Ad -4.5945301 0.0191751 7.99e-05
Eip75B 0.3709680 0.0318989 8.11e-05
Shroom 0.1313370 0.3197339 8.41e-05
fru -0.4643424 0.0310537 8.46e-05
CG33275 0.0151746 0.9272138 8.52e-05
Syt1 -0.1236371 0.6344771 8.98e-05
CG15429 -4.5510141 0.0170741 9.11e-05
CG14207 0.4017750 0.0162642 9.33e-05
CG7510 -0.0079852 0.9611795 9.38e-05
CG7781 -0.0566130 0.8512923 9.38e-05
Nckx30C -0.3307418 0.1336907 9.47e-05
CG42238 -0.2071930 0.3675391 9.98e-05

3.5.2 CTmax

gene log2FoldChange padj AvgMixedPval
bru-2 0.0194085 0.9031527 2.40e-06
CG10803 0.2042566 0.2841924 3.20e-06
CR44999 -1.5430938 0.4979560 3.20e-06
bbg 0.0466567 0.7998299 1.03e-05
CG31862 -3.4237705 0.0517313 1.13e-05
CG10237 0.5458907 0.0122716 1.30e-05
CG15209 -0.2735143 0.3516234 1.32e-05
Ipod -0.9965323 0.1607529 1.59e-05
Pax 0.2485932 0.1216302 1.96e-05
sls 0.0423911 0.8454460 2.30e-05
Ac13E -0.2690525 0.0980766 2.62e-05
CG43143 0.2039697 0.0370219 2.75e-05
Tsp42Ec -0.3633728 0.3857759 2.92e-05
CG32250 0.1884643 0.4676939 3.04e-05
ptc -0.3646174 0.2165868 3.13e-05
CG5151 -0.2536789 0.1120200 3.55e-05
CG4702 -3.0134880 0.0257865 3.67e-05
CG3919 -0.3426462 0.5114996 3.68e-05
Baldspot 0.0433326 0.8354143 4.12e-05
snRNA:U12:73B 0.7927127 0.2280127 4.12e-05
fra 0.2556730 0.0605354 4.71e-05
CG33970 -0.0776135 0.7321118 5.02e-05
KrT95D 0.1158260 0.4000757 6.28e-05
Lectin-galC1 0.2904827 0.2170788 6.50e-05
CG43125 -5.0751074 0.0131608 6.51e-05
CG43340 0.1238626 0.2581477 6.88e-05
CG32485 -0.0655896 0.8226194 7.37e-05
Sk2 0.2706031 0.2431770 7.37e-05
CG3108 -2.2960760 0.3078690 7.76e-05
CG42699 0.0133976 0.9561751 7.76e-05
ndl -0.4771641 0.2468868 8.41e-05
A2bp1 0.0225860 0.9067306 8.48e-05
Zasp66 -0.0836145 0.7791002 8.54e-05
Glut1 -0.3463043 0.0413731 8.69e-05
CG2258 0.3967801 0.0592370 8.71e-05
fz2 0.0159588 0.9228685 8.85e-05
Lapsyn -0.0438681 0.8638514 9.03e-05
CG16791 -0.3145389 0.0392494 9.12e-05
kek6 -0.4800312 0.0569516 9.97e-05